| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2514 |
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| Symbol | |
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| ID | 6161467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2742085 |
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| End bp | 2745597 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665284 |
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| Product | chromosome segregation protein SMC |
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| Protein accession | YP_001791544 |
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| Protein GI | 171059195 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0530303 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGA ATTCGATCAA GCTTTCCGGC TTCAAGTCCT TTGCCGAGCC CACCCATTTC
CAGCTGCCCG GCCAACTGGT CGGCGTGGTC GGCCCGAACG GCTGCGGCAA GTCCAACATC
ATGGACGCGG TGCGCTGGGT GCTGGGCGAG AGCAAGGCCA GCGAGCTGCG CGGCGAGTCG
ATGCAGGACG TCATCTTCAA CGGCAGCGGC AACCGCAAGC CGGCCAGCCG TGCCAGCGTC
GAGCTGATCT TCGACAACGC CAGCGCGCGC GCCGGCGGCC AGTGGAACCA GTTCACCGAG
ATCGCCGTCA AGCGCGTGCT CACCCGCGAC GGCACCAGCA GCTACTACAT CAACAACCAG
CCGGTGCGCC GGCGCGACGT GCAGGACGTC TTCCTCGGCA CCGGCCTGGG GCCGCGCGCC
TACGCCATCA TCGGCCAGGG CACCATCAGC CGCATCATCG AATCGCGCCC CGAGGAGCTG
CGGCTGTTCC TCGAAGAGGC CGCCGGTGTC TCCAAGTACA AGGAGCGTCG CCGCGAGACC
GAGAACCGCC TGAAGGACAC GCGCGAGAAC CTGACCCGCG TCGACGACAT CCTGCGCGAG
CTCAACAGCA ACCTCGAGCG CCTGGAGGCG CAGGCCGCGG TGGCGCAGCG TTACCGCGGA
CTGCAGGACG CCGGCACGCT CAAGCTGCAC CAGCTCTGGT TCCTGAAACA CCGCGACGCC
ACCTCCGAGC AGGACCGCGT GCGCGAGGCG GTGCTGACCG CCACCAACGC GCTCGAATCG
CGCCTGGCCG AGCTGCGCCA CGTCGAGGCC GAGCTGGAGG AAGTGCGCCA GCAGCATTTC
GGCGCCAACG ACGAGCTGCA CGCCGCCCAG GGCGCGCTGG CCGAGGTGTC GATGGAGGTG
AGCCGGCTCG AGGAGCGCAT CCGCCATGTC GTCGAAGGCC GTGCCCGCGC GCAGCAGCGC
CTGGCCGACA GCCAGGCCCA GAACGCGCAG TGGACGCAGC GCCGCGAGCA GGCCGAGACC
GAGCTGGAGA CGCTGGCCGA CCAGATCGCC GCCGCCGAGG AGCAGGGCGA GGTGCTCGCC
GCCCAGGCCG AAGACCAGGC GATGGCCTTG CCCGGTTTCG AGGACGCCGT GCGCGCCGCC
ACGAACACCG CCAACCAGCA GCGCGCCCGC GCCGCCGAGG TGCAGCAGCA GATCCAGCTG
CTGGCCGCGC AGTCGCGCAA CCTCGACGAG CGCCGGCGCG AGCTCAACCA GCGCCGCGAC
CGCCTGGCCG GCGAGCGCCG CGGTCTGGTC GCGCCCGATC TCGATCACCT GGCCGGCTTG
CGCGCCCAGC TCGAACAGGC GCAGGAACAG CAGGCGCTGG CCGACGAGCA GCTGCAGGAG
CTGGCCGCCG AAGTGCCCAC GCTCGACGAG CAGCGCCGCC ACCAGCAGAA CCTCGTCAAC
AGCGAATCGG CGCGCGCGGC TGCGGTCAAG GCCCGGCTCG AGGCGCTGCG GGCGCTGCAG
GAGAAGGTGC AGACCGAAGG CAAGCTCAAG CCCTGGCTGG CCAAGCACGG CCTCGACGGC
CTGGCCGGTC TGTGGACGCG CATCCACATC GAGACCGGCT GGGAGACCGC GCTCGAGGCG
GTGCTGCGCG AGCGCATCGG CGCGCTTGCC GTCGGCCGCA TCGAGACCGT GCGGGCTTTC
GAGCTCGATC CGCCGCCGGC CAAGCTGGCC TTCTACACGG CGCCGCTGTC GGCCATCGCC
AACAGCCACC AGACGCTGCC GCGGCTGTCG GACCTGCTGC GCCTGGCCGA CCCGGGCCTG
AAGGCGCTGC TCAACGACTG GCTCGAAGGT GTCTACACCG CCGCCAGCCT GGACGAGGCG
CTCGCCAATC GCCAGCGCCT GACGCACGGC GAAGTGATCA TGACCGCCGC GGGCCACGCG
GTGAGCCAGT TCGCGGTGAG CTTTTACGCC CCCGACGCCG AGCAGGCCGG CATGCTGGCG
CGCGCCCAGG AGATCGAGAA CCTCGAGCTC GAAGGTCGCG CCCAGGCGCT GCTGTCCGAC
GAGGCGCGCA GCGCGCTGGT GCGCGCCGAA GCCCAGTACA CCGACGCCGC GATGCGCCTG
GCGCGCGTGC GACGCGAGGC GCAGGAGGCT CAGACCCGCG CGCACCAGCT GCAGGTCGAC
GTGCTGCGCC TGGCCCAGCA GGCCGAGCAG GCGACCCAGC GGCGCGACCA GCTCGACGCC
GAGCTGCACG AGATCGACGC CAACCTCGAA GAAAACGAGG AGCGCCGCAT GACCGGCGAG
GCGCGTTTCG AGGAGCTCGA CATCGCGCTG GGCACCGAAC AGGAGCGCCA CGCCGAGCTG
GAAGAAGCGG TGATCGCCGC CGATCGCCGC CTGTCCGACG CCCGCGAGAA GCTGCGCAGC
CTGGAGCGCG CGGCGCAGGA GGCGCAGTTC TCGGCCCGCG CGCTGGCGGC GCGGCGCGGC
GAGCTGCAGC GCAGCATCGA GACCGCGGTG GCGCAGCAGC ACGCCAACGC GCACGCCGCC
GCGCAGATCG AGGACGAACT CGCCCGCTTC GACGACGCCG CGGCCGAGGG CGGCCTGCAG
GAGGCGCTGG CGCTGCGGCT CGAACGCGAG CAGGTGCTGG GCGCTGCGCG CAGCCGCTAC
GACGACCTGT CGGCGCAACT GCGTCGCGCC GACGAGCAGC GCCTGGCCTT CGAGCGCAGC
CTGCAGCCGC TGCGCGACGA GATCACCCGC CTGCAGCTCG AAGAGCAGGC CGCGCACCTG
GGCGGCGCGC AGTTCATGGA GCAGCTGCAG GCCGCCGAGG TCGACCTGGC GATGCTCGCC
GCCGGCATCG AGGCCGACGC CGTCAAGCTC TACGGCCTGC AGACCGAGAT CGACCGCATC
AACCGCGAGA TCGCCGCGCT CGGCGCCGTC AACCTGGCCG CGCTCGACGA GCTGAAGGCG
GCGAGCGAGC GCAAGGGTTT TCTCGACGCC CAGAACGACG ACCTGACGCG CGCGATGAAC
ACGCTCGAGG ACGCGATCCG CAAGATCGAC ATCGAGACCC GCGACCTGCT CAAGGGCACC
TTCGACCAGG TCAACGAAGG TTTCGGCCAG ATGTTCCCGA GCCTGTTCGG CGGTGGCCAG
GCCCGGCTGG TGATGACCGG CGACGAGATC CTGGATGCCG GCGTGCAGGT GATGGCGCAG
CCGCCGGGCA AGAAGAACAG CACCATCCAC CTGCTGTCGG GTGGCGAGAA GGCGCTGACC
GCGATCGCGC TGGTGTTCGC GATCTTCCTG CTCAACCCGG CGCCGTTCTG CCTGCTCGAT
GAAGTGGACG CGCCGCTGGA CGACGCCAAC ACCGAGCGCT ACGCCAAGCT GGTCGAGAAG
ATGTCCGCCG GCACGCAGTT CCTGTTCATC TCGCACAACA AGATCGCGAT GGAAATGGCC
CAGCAGCTGA TCGGCGTGAC GATGCAGGAA CAGGGCGTGT CGCGCATCGT GGCGGTCGAC
ATGGACTCGG CGCTGTCGAT GGCTGAGGCA TGA
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| Protein sequence | MRLNSIKLSG FKSFAEPTHF QLPGQLVGVV GPNGCGKSNI MDAVRWVLGE SKASELRGES
MQDVIFNGSG NRKPASRASV ELIFDNASAR AGGQWNQFTE IAVKRVLTRD GTSSYYINNQ
PVRRRDVQDV FLGTGLGPRA YAIIGQGTIS RIIESRPEEL RLFLEEAAGV SKYKERRRET
ENRLKDTREN LTRVDDILRE LNSNLERLEA QAAVAQRYRG LQDAGTLKLH QLWFLKHRDA
TSEQDRVREA VLTATNALES RLAELRHVEA ELEEVRQQHF GANDELHAAQ GALAEVSMEV
SRLEERIRHV VEGRARAQQR LADSQAQNAQ WTQRREQAET ELETLADQIA AAEEQGEVLA
AQAEDQAMAL PGFEDAVRAA TNTANQQRAR AAEVQQQIQL LAAQSRNLDE RRRELNQRRD
RLAGERRGLV APDLDHLAGL RAQLEQAQEQ QALADEQLQE LAAEVPTLDE QRRHQQNLVN
SESARAAAVK ARLEALRALQ EKVQTEGKLK PWLAKHGLDG LAGLWTRIHI ETGWETALEA
VLRERIGALA VGRIETVRAF ELDPPPAKLA FYTAPLSAIA NSHQTLPRLS DLLRLADPGL
KALLNDWLEG VYTAASLDEA LANRQRLTHG EVIMTAAGHA VSQFAVSFYA PDAEQAGMLA
RAQEIENLEL EGRAQALLSD EARSALVRAE AQYTDAAMRL ARVRREAQEA QTRAHQLQVD
VLRLAQQAEQ ATQRRDQLDA ELHEIDANLE ENEERRMTGE ARFEELDIAL GTEQERHAEL
EEAVIAADRR LSDAREKLRS LERAAQEAQF SARALAARRG ELQRSIETAV AQQHANAHAA
AQIEDELARF DDAAAEGGLQ EALALRLERE QVLGAARSRY DDLSAQLRRA DEQRLAFERS
LQPLRDEITR LQLEEQAAHL GGAQFMEQLQ AAEVDLAMLA AGIEADAVKL YGLQTEIDRI
NREIAALGAV NLAALDELKA ASERKGFLDA QNDDLTRAMN TLEDAIRKID IETRDLLKGT
FDQVNEGFGQ MFPSLFGGGQ ARLVMTGDEI LDAGVQVMAQ PPGKKNSTIH LLSGGEKALT
AIALVFAIFL LNPAPFCLLD EVDAPLDDAN TERYAKLVEK MSAGTQFLFI SHNKIAMEMA
QQLIGVTMQE QGVSRIVAVD MDSALSMAEA
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