| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2508 |
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| Symbol | |
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| ID | 6162516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2734659 |
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| End bp | 2736554 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665278 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791538 |
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| Protein GI | 171059189 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00132827 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGAAGA AGCGACCATC CCTTTCATCG TTTCTGATCG GCTTGGCTGC GGGCGTGCTG
CCGCCGCATG TGGCTGCGCT GGAATTCGGC CCCGCGCCCC AAAGCATCGC ACTCGGCCAG
CCTCTCGATT TCTCGGTGCC GCTGCGCCTG GAGCCGGGCG AATCGACCGC CCCGGATTGC
ACCATCGCCG ACGTCACGCT CGGCGATGAA CACCTGCCGG CGCCGCTGGT GCGAACCCGG
CTCGAACGGA CCGATCTGCG GTCGGCGCTG ATCCGGGTGA CGTCCACCCA GGCAGTCAAC
GAGCCGCTGG TCACGGTGGA GCTTTCGGTC GGTTGCGGGT CGCGCATCAC GCGTCGGTTC
GTGGTGCTGG CCGACCCCTC GCTCGCGCCG GCCGTTGCGC CGGCCGTTGC GCCGTCGGTT
GCCGCCCCGC CGGTGGCGTT GCCGGTGGCC GAGCCGTTGC GCGACGCGCC GCCACCGCCG
CGTGCCGCCG TTGCCGCGCC GGCCAGCACG GCGCGAGCCG CGGAGCCCGC GCCTGCGGTT
CCACGCCCGG CACCCGGCAG CGCGCCACCG GCCACCAGGA AACCGAAGGA AACCCGTGCC
GCGCCGGCGC CTCGCACGCG GGCGAGCGAA TCCGCCATCG TGGCACCCGA CAGGCCGCGC
CTCAGGATGG ACGTGGTCGA GCCCACGGCG ACGACGGCCA AACCGCTGGC CACCATCGTC
GAGGAGGCGC TGCAGGCCAT CGAGGCCGCC GCGCAGTCGG CCAGTTCGGC CGGCGCTGCG
GCATCGGCCG CCCCCACCGC GTCGACGCGG ATCGCGGCAC TCGAAAAGAC CGTCCTCGAC
CTGCACAAGG AGTCGCAGGT CCAGCGTGAA CTGATGCTGC AGATGCAGGC GCAGCTGCTG
GCCGCGGAAA CAGCCAACCG CTGGGTCATG CCCTTGTCGA TCATGCTGGT AGGGCTGACG
GGCCTGGCCG GCTGGCTGGC CTGGCGGGTG CGACAGCTGC AGCGCGGGGG GCGGTCGGAC
AACCCGCCGA GCAACTTGCC CGTGCCGGCG TCAGGCGTGG CCGATGACGA GGCCATCTCC
CTGCCGCCGA ACTACGACTC GACCAGCCCG CCCAGCGCGA ACCTCAACGG CGGATCGCCG
CGCGACGTGT CGATCGAGGA ACTGATCGAC CTGGAGCAGC AGGCCGAGTT CTTCATCGCG
CTGGGCCAGG AGGACTCCGC CGTCGAGCTG CTGACCGACC ATCTGCGCAA CAGCGAAGGC
GGCAGCCCGC TGGCCTACCT GAAGCTGCTG GAGATCTACA AGCGCCGGGA CGACCGGGCG
TCCTACGAGC GCATCCGGGT CGGCTTCAAC CAGCGCTTCA ACGCCTACGC GCCGGTCTGG
GAGGCCGATC TGCAGGCCGG ACTGGTGCTC GAAGACTACC CCGAGGTGAT GCAGCAGCTG
CAGAAGGTGT GGCCCCGCCC GCTGGCTGCG ATGGCGGAGC TGGGGATGCT GATCTTCCAC
ACCACGCGCG GCGACGTCTT CGATCTGCCC GCCTACCGCG ACGTGCTGTT CCTGTACGCA
CTGGCTCGCG ACCTGGCCGA CCACAACGAG CCGACGATCC AGCGCATCGC CCTGATGTCG
CCGCTGCCCG AGGTGTCCGA GTTCAGCGAC ACCGCCCAGC ATGTGGAACC GGTCGACGAT
CGCCTGCCGA GCATCGACGC CACCGACAGC GAGCTGCCCA CCACGATGGT CGAACTGGTC
GACCTGGACC TGCATCTGGA TCTCGACCTC GACAGCAGCA ACACCGTGGA GGTCCAGACC
GCCACCGCCA TCGACACCGA TGAGGTCCCC GAGCTGGACC TGGACCTGGA TCTGTCCGAC
CCGTTGTATT CCGACCGCAA GATACGGCGG CAGTGA
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| Protein sequence | MQKKRPSLSS FLIGLAAGVL PPHVAALEFG PAPQSIALGQ PLDFSVPLRL EPGESTAPDC
TIADVTLGDE HLPAPLVRTR LERTDLRSAL IRVTSTQAVN EPLVTVELSV GCGSRITRRF
VVLADPSLAP AVAPAVAPSV AAPPVALPVA EPLRDAPPPP RAAVAAPAST ARAAEPAPAV
PRPAPGSAPP ATRKPKETRA APAPRTRASE SAIVAPDRPR LRMDVVEPTA TTAKPLATIV
EEALQAIEAA AQSASSAGAA ASAAPTASTR IAALEKTVLD LHKESQVQRE LMLQMQAQLL
AAETANRWVM PLSIMLVGLT GLAGWLAWRV RQLQRGGRSD NPPSNLPVPA SGVADDEAIS
LPPNYDSTSP PSANLNGGSP RDVSIEELID LEQQAEFFIA LGQEDSAVEL LTDHLRNSEG
GSPLAYLKLL EIYKRRDDRA SYERIRVGFN QRFNAYAPVW EADLQAGLVL EDYPEVMQQL
QKVWPRPLAA MAELGMLIFH TTRGDVFDLP AYRDVLFLYA LARDLADHNE PTIQRIALMS
PLPEVSEFSD TAQHVEPVDD RLPSIDATDS ELPTTMVELV DLDLHLDLDL DSSNTVEVQT
ATAIDTDEVP ELDLDLDLSD PLYSDRKIRR Q
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