Gene Lcho_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2488 
Symbol 
ID6160650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2711413 
End bp2712894 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content68% 
IMG OID641665258 
Producthypothetical protein 
Protein accessionYP_001791518 
Protein GI171059169 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000005814 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAGAC GCGATTTCTT GCAGTACGGC GCCATGGCCG CTACCGCCGC CACGCTGCAG 
GGCTGTGGTG GCGGCAGCGA GCCGGACAAG GAAGCGCCCC AGCCCCGGGT GGTGATTCTG
TGGAACAGCG CGGCCCTGGC CGCGGTGCGC GACGCCAAAC CCGGTCCGCC GATGGTGGCC
CGCTCGTTGG CCGTGATTCA CACCGCCATG TTCGATGCCT GGGCCGCCTA TGACGCCGTG
GCCGTCGGCA CCCAGCTGCG CGGTGCGTTG CGCCGCCCCG GAGCCGAGCG CAGCGCCGCA
GCCAAGGTCA AGGCCATCAG CCAGGCCGCC TATGCCGCCG GCCTGAACCA GTACCCGGCG
CAAAAGCCCA TCTTTGACCA ACTGATGAGT CAGCTCGGCT TCAGCCCATC GAGCTCCGTC
GATCCGGCCC AGCCCGAAGG CATCGGCAAC CTCGCCGCGC AGGCCGTGAT GGACTACCGC
CGCGGCGACG GCGCGAACCA GGACGGCAGC CTGACCGCCT CCGGCATCCC CTACTCGGAC
TACACCGGCT ATGCGCCCGC CAACCCCGCC ACCGTGTTCA CCGGCGGCAC CGTGCTTTCG
GCGATTCCGG CCCCCGACCG CTGGCAGCCC CTGACCTTCA CTGACGGGGC CGGCATGACC
CGCACGCCCG GCTTCATTGC GCCGCACTGG CGTCATGTCC GGTCCTTCGC CATGAGTTCG
GCCAGCCAGT TCCGCCCTGC ACCGCCGGCA GCCCTGAACA CGCCTGCCTT CACCGCCCAG
GCCCAGCAAC TCGTCGATCT GCTGCCCAAC CTGACCGAGA AGCAGAAGTG CATCTCGGAA
TACTGGGCCG ACGGCCCGAG TTCCGAACTG CCGCCGGGGC ACTGGAATTT GTTTGCCCAG
TACATTTCCA CGCGCGACAA GTACGACAAC GACCGGGACG TGCGCCTGTT CTTCGCGCTG
ACGAATGCCA TCTTCGACGC CAGCATCGCC ACCTGGGAAT GCAAGCGCTT CTACGACTAC
GTGCGCCCCG TCACCGCCAT TCGCTACCTG TTCAACAGCC AGACCATCAA GGGCTATGGC
GCCGGCGGGC CGGCCGCGGG TGTGGTGAAC ATCAGTGGGG CCAGCTGGCG CCCCTTCCAG
CGCGACACAT TCCCGACCCC GCCCTTTGCG GAATACACCT CGGGCCACAG CGCCTTCTCC
GCTGCCGGGG CCGAGGTGCT GCGCAGTTTC ACCGGCAGCG ACAGCTTCGG CCACAGTGCG
GTGATTGTCG CCCGCTCCCT GACGGCCGAC ACCGGCCTGC CGGCCGCGCC GGTCACCCTG
GCCTGGGCCA GCTTTACCGA GGCCGCGGAA GAAGCAGGCA TGTCCCGTTT GTATGGGGGC
CTCCACTTCG CCGACGGCAA CAACGCCGGC CGGGACATCG GCATCAAGAC CGGCGCCCAA
GCCTATGCCA AGGCGCGGCG CTACTGGGAA GGTACCGCCT GA
 
Protein sequence
MNRRDFLQYG AMAATAATLQ GCGGGSEPDK EAPQPRVVIL WNSAALAAVR DAKPGPPMVA 
RSLAVIHTAM FDAWAAYDAV AVGTQLRGAL RRPGAERSAA AKVKAISQAA YAAGLNQYPA
QKPIFDQLMS QLGFSPSSSV DPAQPEGIGN LAAQAVMDYR RGDGANQDGS LTASGIPYSD
YTGYAPANPA TVFTGGTVLS AIPAPDRWQP LTFTDGAGMT RTPGFIAPHW RHVRSFAMSS
ASQFRPAPPA ALNTPAFTAQ AQQLVDLLPN LTEKQKCISE YWADGPSSEL PPGHWNLFAQ
YISTRDKYDN DRDVRLFFAL TNAIFDASIA TWECKRFYDY VRPVTAIRYL FNSQTIKGYG
AGGPAAGVVN ISGASWRPFQ RDTFPTPPFA EYTSGHSAFS AAGAEVLRSF TGSDSFGHSA
VIVARSLTAD TGLPAAPVTL AWASFTEAAE EAGMSRLYGG LHFADGNNAG RDIGIKTGAQ
AYAKARRYWE GTA