Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2488 |
Symbol | |
ID | 6160650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2711413 |
End bp | 2712894 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641665258 |
Product | hypothetical protein |
Protein accession | YP_001791518 |
Protein GI | 171059169 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000000005814 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAGAC GCGATTTCTT GCAGTACGGC GCCATGGCCG CTACCGCCGC CACGCTGCAG GGCTGTGGTG GCGGCAGCGA GCCGGACAAG GAAGCGCCCC AGCCCCGGGT GGTGATTCTG TGGAACAGCG CGGCCCTGGC CGCGGTGCGC GACGCCAAAC CCGGTCCGCC GATGGTGGCC CGCTCGTTGG CCGTGATTCA CACCGCCATG TTCGATGCCT GGGCCGCCTA TGACGCCGTG GCCGTCGGCA CCCAGCTGCG CGGTGCGTTG CGCCGCCCCG GAGCCGAGCG CAGCGCCGCA GCCAAGGTCA AGGCCATCAG CCAGGCCGCC TATGCCGCCG GCCTGAACCA GTACCCGGCG CAAAAGCCCA TCTTTGACCA ACTGATGAGT CAGCTCGGCT TCAGCCCATC GAGCTCCGTC GATCCGGCCC AGCCCGAAGG CATCGGCAAC CTCGCCGCGC AGGCCGTGAT GGACTACCGC CGCGGCGACG GCGCGAACCA GGACGGCAGC CTGACCGCCT CCGGCATCCC CTACTCGGAC TACACCGGCT ATGCGCCCGC CAACCCCGCC ACCGTGTTCA CCGGCGGCAC CGTGCTTTCG GCGATTCCGG CCCCCGACCG CTGGCAGCCC CTGACCTTCA CTGACGGGGC CGGCATGACC CGCACGCCCG GCTTCATTGC GCCGCACTGG CGTCATGTCC GGTCCTTCGC CATGAGTTCG GCCAGCCAGT TCCGCCCTGC ACCGCCGGCA GCCCTGAACA CGCCTGCCTT CACCGCCCAG GCCCAGCAAC TCGTCGATCT GCTGCCCAAC CTGACCGAGA AGCAGAAGTG CATCTCGGAA TACTGGGCCG ACGGCCCGAG TTCCGAACTG CCGCCGGGGC ACTGGAATTT GTTTGCCCAG TACATTTCCA CGCGCGACAA GTACGACAAC GACCGGGACG TGCGCCTGTT CTTCGCGCTG ACGAATGCCA TCTTCGACGC CAGCATCGCC ACCTGGGAAT GCAAGCGCTT CTACGACTAC GTGCGCCCCG TCACCGCCAT TCGCTACCTG TTCAACAGCC AGACCATCAA GGGCTATGGC GCCGGCGGGC CGGCCGCGGG TGTGGTGAAC ATCAGTGGGG CCAGCTGGCG CCCCTTCCAG CGCGACACAT TCCCGACCCC GCCCTTTGCG GAATACACCT CGGGCCACAG CGCCTTCTCC GCTGCCGGGG CCGAGGTGCT GCGCAGTTTC ACCGGCAGCG ACAGCTTCGG CCACAGTGCG GTGATTGTCG CCCGCTCCCT GACGGCCGAC ACCGGCCTGC CGGCCGCGCC GGTCACCCTG GCCTGGGCCA GCTTTACCGA GGCCGCGGAA GAAGCAGGCA TGTCCCGTTT GTATGGGGGC CTCCACTTCG CCGACGGCAA CAACGCCGGC CGGGACATCG GCATCAAGAC CGGCGCCCAA GCCTATGCCA AGGCGCGGCG CTACTGGGAA GGTACCGCCT GA
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Protein sequence | MNRRDFLQYG AMAATAATLQ GCGGGSEPDK EAPQPRVVIL WNSAALAAVR DAKPGPPMVA RSLAVIHTAM FDAWAAYDAV AVGTQLRGAL RRPGAERSAA AKVKAISQAA YAAGLNQYPA QKPIFDQLMS QLGFSPSSSV DPAQPEGIGN LAAQAVMDYR RGDGANQDGS LTASGIPYSD YTGYAPANPA TVFTGGTVLS AIPAPDRWQP LTFTDGAGMT RTPGFIAPHW RHVRSFAMSS ASQFRPAPPA ALNTPAFTAQ AQQLVDLLPN LTEKQKCISE YWADGPSSEL PPGHWNLFAQ YISTRDKYDN DRDVRLFFAL TNAIFDASIA TWECKRFYDY VRPVTAIRYL FNSQTIKGYG AGGPAAGVVN ISGASWRPFQ RDTFPTPPFA EYTSGHSAFS AAGAEVLRSF TGSDSFGHSA VIVARSLTAD TGLPAAPVTL AWASFTEAAE EAGMSRLYGG LHFADGNNAG RDIGIKTGAQ AYAKARRYWE GTA
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