| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2486 |
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| Symbol | |
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| ID | 6160648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2708431 |
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| End bp | 2709834 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665256 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001791516 |
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| Protein GI | 171059167 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000000215978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGACTGA GCTTCATCGG CGCCGCGCAG GAAGTCACCG GATCGTGTTT TCTCGTCGAG
ACCGACGAGG TGCGCTTTCT GGTCGACTGC GGCATGTTCC AGGGCGGGCG CGAGGTCCGC
GAGCGCAATT TCCAGGGCTG GCCGTTCGAT CCGCGCACGC TCGACTTCGT GCTGCTGACA
CACGCGCACA TCGACCACAG CGGCCTGCTG CCACGCCTGT GCGCGCTCGG TTTCAAGGGC
CCGATCCACA CCACCACGGC CACCGCGGAC CTGCTGTCGG TGATGCTGCT CGACAGCGCC
TTCATCCAGG AGTCCGACTG GACCCGCGCC CAGCGCAAGC GCGGACGCAC GCCCCGCAAC
GGCGCGGCGC CGGCCGAGCT GCTGTACACG GTGGCACAGG CCGAGGCCTG CCTGGCGCAG
GTGCGCGGCG TCGCCTACGA CACCGAGCTC AAGCCGCACG CCGACGTGCG CTGCCGCTTC
CGCGACGCCG GCCACATCCT CGGCTCGGCG ATCGCCGAGA TCTGGCTCGA CGAGCCCGGC
CGCACGCGCA AGCTGGTGTT CTCGGGCGAC CTCGGCCAGC CCGGCCGGCC GATCGTGCGC
GACCCGACGC CGATCGCCGA CGCCGACGTG CTGGTGGTCG AGTCGACCTA CGGCAACCGC
CTGCACCGGC CGATGCAGGA AACCGTCGAC GAGCTGGTGC GGGTGATCGA GGACGTGCTG
CGCCGCCGCC AGGGCAACGT CATCATCCCG GCCTTCGCGC TCGGGCGCAC GCAGGAGGTG
CTGTACCTGC TGACCGACCT GTGCCGCAGC GGCCGGCTGC CACCGCTGCA GGTGTTCGTC
GATTCGCCGA TGGCCGACAA GGTGACGGCC ATCACCGAAA AGCACCCCGA GTTCCTCGAC
GACGAGACCC GGGCGCAGCT GTCGCAGCGC CACGCACGGC AGGGGCCGCT GCACCTGCGC
TTCACCCAGA GCGTCGAGGA ATCGATCGAG CTGAACCGCA TCAAGGCCGG CGCCATCATC
ATCGCCGCCA GCGGCATGTG CGACGCCGGG CGCATCAAGC ACCACCTGCG CCACCACCTC
GGCCGCCCGG AGTGCGCCGT CGTCATCATC GGTTTCCAGG CCGTCGGCAC GCTCGGGCGG
CGGCTGGTGG ACGGCGACAA GCAGGTGCGC ATCTTCGGCG AGGAGCTGAA GGTCCGCGCC
AGCGTGCACA CCATCGGCGG CCTGTCGGCC CACGCCGACC AGGCCGCGCT GCTGGGCTGG
CTGCGCGGCT TCAGGCGCGC GCCGGCGCAG ACCTTCGTGG TGCACGGCGA GTCGGCCACC
GCCTGCGGTT TCGCCGACAC CATCGCCGCC GAGCTGGGCT GGCGCGTCGA GGCGCCGCCA
GCGGGCGCCC GGATCGAGCT CTGA
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| Protein sequence | MRLSFIGAAQ EVTGSCFLVE TDEVRFLVDC GMFQGGREVR ERNFQGWPFD PRTLDFVLLT
HAHIDHSGLL PRLCALGFKG PIHTTTATAD LLSVMLLDSA FIQESDWTRA QRKRGRTPRN
GAAPAELLYT VAQAEACLAQ VRGVAYDTEL KPHADVRCRF RDAGHILGSA IAEIWLDEPG
RTRKLVFSGD LGQPGRPIVR DPTPIADADV LVVESTYGNR LHRPMQETVD ELVRVIEDVL
RRRQGNVIIP AFALGRTQEV LYLLTDLCRS GRLPPLQVFV DSPMADKVTA ITEKHPEFLD
DETRAQLSQR HARQGPLHLR FTQSVEESIE LNRIKAGAII IAASGMCDAG RIKHHLRHHL
GRPECAVVII GFQAVGTLGR RLVDGDKQVR IFGEELKVRA SVHTIGGLSA HADQAALLGW
LRGFRRAPAQ TFVVHGESAT ACGFADTIAA ELGWRVEAPP AGARIEL
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