Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2485 |
Symbol | |
ID | 6160647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2707337 |
End bp | 2708299 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641665255 |
Product | hypothetical protein |
Protein accession | YP_001791515 |
Protein GI | 171059166 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000000000714276 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGAAGA CCCTGATCAC GCTGTTGACC GCCCTCGTCA CCGCCACCGG TGCGCAGGCC CAGGCCTGGC CGAACAAGCC GGTCACGCTG CTGGTGCCGT TCCCGGCCGG CGGCTCGACG GATGCCATCG CGCGGGCGAT CTCGCCCAAG CTGCAGGAGC GGCTGGGCGC CACCTTCGTG GTCGAGAACA AGGCCGGCGC CGGCGGCACG GTCGGCGCGG CGCAGGCCAA GCGCGCGGCG CCGGACGGCT ACACGATCTT CGTCTCGTCG CTCGGGCCGT TCGTGATCGG GCCGCACCTG ATCAAGAGCG CCGCCTACGA TCCGCTCAAG GACTTCGACT ACATCACCGT CGCGGTGCAG GCGCCCAACG TGCTGGCGGT GCCGGCCAAC TCGCCGCACA AGACGCTGGC CGACGTGATC GCCTTCCACA AGGCCAACCC GGGCAAGATG AGCTTCGCCT CGTCGGGCAA CGGCTCCAGC GACCACCTGA CGGCCGAGCT GTTCTGGCAG ATCACCGGCA CCAGCGGCCT GCACGTGCCG TACAAGGGCG GCGCGCCGGC GATGTCCGAC CTGCTGGGCA GCCAGGTCGA CGCGACCTTC ATGAACATCA ACACCGGTCT CACCAACATC AAGGCCGGCA AGCTGCGCGC GCTGGCCATC ACCAGCGCCA AGCGCTCGCC GCTGCTGCCG GACGTGCCCA CGCTGGAAGA ATCCGGCATC AAGGGCGCCA CGGTCTATTC GTGGCAGGCG CTCGCCGCGC CCAAGGGGCT GCCGGCCGAC ATCAAGAGCA AGCTGCACGA GTCGATCGTG GCCGCGCTGA ACGACGCCTC GATCAAGCCC AAGCTGCTGG AACTGGGCTT CGAGATCGTC GCCAACACGC CCGAGCAGTT CACCGCCTTC CAGGCCGCCG AGTTCGCGCG CTGGAAGAAG GTGATCGAGG TCGGCAAGAT CACGGCCGAC TGA
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Protein sequence | MKKTLITLLT ALVTATGAQA QAWPNKPVTL LVPFPAGGST DAIARAISPK LQERLGATFV VENKAGAGGT VGAAQAKRAA PDGYTIFVSS LGPFVIGPHL IKSAAYDPLK DFDYITVAVQ APNVLAVPAN SPHKTLADVI AFHKANPGKM SFASSGNGSS DHLTAELFWQ ITGTSGLHVP YKGGAPAMSD LLGSQVDATF MNINTGLTNI KAGKLRALAI TSAKRSPLLP DVPTLEESGI KGATVYSWQA LAAPKGLPAD IKSKLHESIV AALNDASIKP KLLELGFEIV ANTPEQFTAF QAAEFARWKK VIEVGKITAD
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