| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2477 |
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| Symbol | |
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| ID | 6160463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2696875 |
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| End bp | 2697852 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665247 |
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| Product | ribokinase-like domain-containing protein |
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| Protein accession | YP_001791507 |
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| Protein GI | 171059158 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0524] Sugar kinases, ribokinase family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000000321874 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCCA CGCAGCACAT CCGCCACTGG CGCAACCGCT CGGTGCTGGG CATCGGCGAG
GCGATGGTCG AGTTCGCCCC GACCGGTGGC GACACCTATC GCCGCGGCTT TGCCGGCGAC
ACCCTCAACA CCTGCTGGCA CATGGCGCAG ATCCTCGGCG CGCACGCGTC GGTGGGCTAT
TTCACGAAGG TCGGCAACGA CGCCTTCTCC GACCAGCTGG TGGCCTTCAT CGAGGCCAGC
CGGATGGACG CGCAGCGCAT CGCCAGAGAC CCGCAGCGCA CCCTCGGGCT CTACGTCATC
AGCCTGGCCG GGGCCGAGCG CAGCTTCACC TATTGGCGCG AGACCTCGGC CGCGCGACGC
CTGGCCGACG ACCTCGCCGT TCTGGCCGAT GCGACGCGCG ACTGCGGCCT GATCCACGTC
TCGGGCATCA CGCTGGCCGT CATCGGCGAG ACCGGGCGCC GGCACCTGTT CCAGGCGCTG
GCACAGGCCC GCAGCGCCGG CGCGGGGGTG TCGTTCGACC CCAACGTGCG CCTGCGGCTC
TGGCGCGACG TGGCGGAACT GCGCGCGGCC ACGCAGGCCA TGCTGGCGGT CACCGACATC
GCGCTGCCGA GCTTCGACGA CGAGGCGCAG GTCTGGGGCG ATGCGGATCC GCAGGCGACG
CTGGCCCGCT TCGAGGCCGC CGGCGTGGCC GAGATCGTGG TCAAGAACGG CGCGCAGGAT
GTGGCGTATT CGGTGGCCGG CCGCCGCGGT CATCTGCCGA CGCCCGACGT GACGGACATC
CGCGACACCA CCGGCGCCGG TGACTCGTTC AACGCGGGCT ACCTCGCCGG CCGGCTGGTG
GGCATGGACC CGCTGGTCTC ATGCCGGCTC GGCCAGCAGG TCGCCGGCGT GGTCATCGGT
CACCACGGCG CCCTGGCGCC CGAGGGGGCG CTGACGGAAG TCCGGCAATG GATCGATCGA
CACGTCATCA AGCCGTGA
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| Protein sequence | MTPTQHIRHW RNRSVLGIGE AMVEFAPTGG DTYRRGFAGD TLNTCWHMAQ ILGAHASVGY
FTKVGNDAFS DQLVAFIEAS RMDAQRIARD PQRTLGLYVI SLAGAERSFT YWRETSAARR
LADDLAVLAD ATRDCGLIHV SGITLAVIGE TGRRHLFQAL AQARSAGAGV SFDPNVRLRL
WRDVAELRAA TQAMLAVTDI ALPSFDDEAQ VWGDADPQAT LARFEAAGVA EIVVKNGAQD
VAYSVAGRRG HLPTPDVTDI RDTTGAGDSF NAGYLAGRLV GMDPLVSCRL GQQVAGVVIG
HHGALAPEGA LTEVRQWIDR HVIKP
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