Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2475 |
Symbol | |
ID | 6161874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2694687 |
End bp | 2696105 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641665245 |
Product | histidine kinase |
Protein accession | YP_001791505 |
Protein GI | 171059156 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000000186434 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGCC CCGGCATCAC CATCCAACTC TTCCTGGCCG TGCTGGCCGT CGCCACGCTG GTCGCCGTGG CGATGGGCGC GGCGGCGCAG CTGAGCTTCA GCCGCGGCTT CATCGGCTAC CTCAACGAGC AGGCGGTGCA GCGCATGGAG GCCGCGATCC CGCGCCTGCA GCAGGCCTAC GGCGAGCGCG GCGGCAGCTG GGCCTTCCTG CACGGCAAGC CCGGCGCCTG GTTCCGGCTG ATCGAGGCCG AGGCCGGCAC CGACCTCAGC GGCCCGTGGG ACGCCGACCC CGACCTGCTG GCGCCGCACC TGCTCGGCCT GGGCCGGCGG CTGACGCTGC TCGATGCGCA GCGCCAGCGC GTCATCGGCT ACCCCAACCT CTACGCCGAC TCCGAGCAGC GCGAGATCAC CGTCGACGGC CGCAGCGTCG GCTGGATCGC GCTGGCGCCG ATCCAGTCGG TCACCGATGC CGCGACGCTG CGGTTCCTCG ACAGCCAGCT GCGTGCCATC CTGGCGATGG GCGCGCTGGC ACTGGTGCTG GCCACGCTGA TCGCCTGGTG GGTGGCGCGC GCCCTGCTCG CGCCGGTGCG CGAGGTCGCC GCGGCCACCC ATCGCCTGGC GGCCGGACAC CACGACACCC GGGTGTCGAT CCGCAGCAAG GACGAGGTCG GCCAGCTGGC GCAGGATTTC AACCAGCTCG CCCTCACGCT CGAGCGCAAC GAACGCATGC GGCGCGACTA CATGGCCGAC ATCTCGCACG AGCTGCGCAC GCCGCTGTCG GTGCTGCGCG GCGAGATCGA GGCGATGGAG GACGGCATCC ACCCGCTCAC GCCACAGAAC CTGGGCGTGC TGCACGGCGA GGTGCAGACG CTCACCCAGC TGGTCAACGA CCTGCACGAG CTGGCGCTGG CCGACGTCGG CGCGCTGCGC TACCGCAAGA CCGACCTCGA CCTGGCGCCG CTGCTGGCCC GCGAGGCGGC ACAGTTCGGC ACCCGCTGCG CCGAGCGCCG GCTGCGCCTG GAGGTCGACA CGGGCACAGA AGCCGTCACC GTGCAGGCCG ACGCCGACCG CCTGCGCCAG CTGCTGCACA ACCTGCTCGA CAACGCGGTG CGCTACACCG ATCCGGGCGG CAGCTTGCAG GTTCGGCTGC GAGCCCAAGG CACGTGGGCG GTGATCGACA TCGAAGACTC GGCGCCGGGC GTGCCGACCG AGCAGCTGCC GCGGCTGTTC GAGCGCTTCT TCCGGGTCGA AGCGTCGCGC GGCCGCGCCG GTGGTGGCAG CGGTCTGGGG CTGGCGATCT GCCGCAGCAT CGTGCAGGCC CACGGCGGCG ACATCACCGC GCACGCCTCG CCGCTGGGCG GCGTGCGCAT CGAGATCCGG CTGCCGCTGC TGCAGGCCGT GACGGAGAAC CCCGCATGA
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Protein sequence | MKRPGITIQL FLAVLAVATL VAVAMGAAAQ LSFSRGFIGY LNEQAVQRME AAIPRLQQAY GERGGSWAFL HGKPGAWFRL IEAEAGTDLS GPWDADPDLL APHLLGLGRR LTLLDAQRQR VIGYPNLYAD SEQREITVDG RSVGWIALAP IQSVTDAATL RFLDSQLRAI LAMGALALVL ATLIAWWVAR ALLAPVREVA AATHRLAAGH HDTRVSIRSK DEVGQLAQDF NQLALTLERN ERMRRDYMAD ISHELRTPLS VLRGEIEAME DGIHPLTPQN LGVLHGEVQT LTQLVNDLHE LALADVGALR YRKTDLDLAP LLAREAAQFG TRCAERRLRL EVDTGTEAVT VQADADRLRQ LLHNLLDNAV RYTDPGGSLQ VRLRAQGTWA VIDIEDSAPG VPTEQLPRLF ERFFRVEASR GRAGGGSGLG LAICRSIVQA HGGDITAHAS PLGGVRIEIR LPLLQAVTEN PA
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