Gene Lcho_2475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2475 
Symbol 
ID6161874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2694687 
End bp2696105 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content73% 
IMG OID641665245 
Producthistidine kinase 
Protein accessionYP_001791505 
Protein GI171059156 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000000186434 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGCC CCGGCATCAC CATCCAACTC TTCCTGGCCG TGCTGGCCGT CGCCACGCTG 
GTCGCCGTGG CGATGGGCGC GGCGGCGCAG CTGAGCTTCA GCCGCGGCTT CATCGGCTAC
CTCAACGAGC AGGCGGTGCA GCGCATGGAG GCCGCGATCC CGCGCCTGCA GCAGGCCTAC
GGCGAGCGCG GCGGCAGCTG GGCCTTCCTG CACGGCAAGC CCGGCGCCTG GTTCCGGCTG
ATCGAGGCCG AGGCCGGCAC CGACCTCAGC GGCCCGTGGG ACGCCGACCC CGACCTGCTG
GCGCCGCACC TGCTCGGCCT GGGCCGGCGG CTGACGCTGC TCGATGCGCA GCGCCAGCGC
GTCATCGGCT ACCCCAACCT CTACGCCGAC TCCGAGCAGC GCGAGATCAC CGTCGACGGC
CGCAGCGTCG GCTGGATCGC GCTGGCGCCG ATCCAGTCGG TCACCGATGC CGCGACGCTG
CGGTTCCTCG ACAGCCAGCT GCGTGCCATC CTGGCGATGG GCGCGCTGGC ACTGGTGCTG
GCCACGCTGA TCGCCTGGTG GGTGGCGCGC GCCCTGCTCG CGCCGGTGCG CGAGGTCGCC
GCGGCCACCC ATCGCCTGGC GGCCGGACAC CACGACACCC GGGTGTCGAT CCGCAGCAAG
GACGAGGTCG GCCAGCTGGC GCAGGATTTC AACCAGCTCG CCCTCACGCT CGAGCGCAAC
GAACGCATGC GGCGCGACTA CATGGCCGAC ATCTCGCACG AGCTGCGCAC GCCGCTGTCG
GTGCTGCGCG GCGAGATCGA GGCGATGGAG GACGGCATCC ACCCGCTCAC GCCACAGAAC
CTGGGCGTGC TGCACGGCGA GGTGCAGACG CTCACCCAGC TGGTCAACGA CCTGCACGAG
CTGGCGCTGG CCGACGTCGG CGCGCTGCGC TACCGCAAGA CCGACCTCGA CCTGGCGCCG
CTGCTGGCCC GCGAGGCGGC ACAGTTCGGC ACCCGCTGCG CCGAGCGCCG GCTGCGCCTG
GAGGTCGACA CGGGCACAGA AGCCGTCACC GTGCAGGCCG ACGCCGACCG CCTGCGCCAG
CTGCTGCACA ACCTGCTCGA CAACGCGGTG CGCTACACCG ATCCGGGCGG CAGCTTGCAG
GTTCGGCTGC GAGCCCAAGG CACGTGGGCG GTGATCGACA TCGAAGACTC GGCGCCGGGC
GTGCCGACCG AGCAGCTGCC GCGGCTGTTC GAGCGCTTCT TCCGGGTCGA AGCGTCGCGC
GGCCGCGCCG GTGGTGGCAG CGGTCTGGGG CTGGCGATCT GCCGCAGCAT CGTGCAGGCC
CACGGCGGCG ACATCACCGC GCACGCCTCG CCGCTGGGCG GCGTGCGCAT CGAGATCCGG
CTGCCGCTGC TGCAGGCCGT GACGGAGAAC CCCGCATGA
 
Protein sequence
MKRPGITIQL FLAVLAVATL VAVAMGAAAQ LSFSRGFIGY LNEQAVQRME AAIPRLQQAY 
GERGGSWAFL HGKPGAWFRL IEAEAGTDLS GPWDADPDLL APHLLGLGRR LTLLDAQRQR
VIGYPNLYAD SEQREITVDG RSVGWIALAP IQSVTDAATL RFLDSQLRAI LAMGALALVL
ATLIAWWVAR ALLAPVREVA AATHRLAAGH HDTRVSIRSK DEVGQLAQDF NQLALTLERN
ERMRRDYMAD ISHELRTPLS VLRGEIEAME DGIHPLTPQN LGVLHGEVQT LTQLVNDLHE
LALADVGALR YRKTDLDLAP LLAREAAQFG TRCAERRLRL EVDTGTEAVT VQADADRLRQ
LLHNLLDNAV RYTDPGGSLQ VRLRAQGTWA VIDIEDSAPG VPTEQLPRLF ERFFRVEASR
GRAGGGSGLG LAICRSIVQA HGGDITAHAS PLGGVRIEIR LPLLQAVTEN PA