Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2474 |
Symbol | |
ID | 6161873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2693194 |
End bp | 2694534 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641665244 |
Product | ferric reductase domain-containing protein |
Protein accession | YP_001791504 |
Protein GI | 171059155 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4097] Predicted ferric reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000000153694 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAGACCT ACCGAGTCAA ACAAGCTTTC ATCGCGGCCC TGGTGCTGCT CACGGGCCTG TGGCTGCTGG CCGAGCCGCA GCTGCCGCAG CCGCTGACCT ACTTCGGCTT TCGCGCCGTG TTCATGCAGT ACAGCGGCGT GATCGCGATC GGCGTGATGA GCCTGTCGAT GCTGCTGGCG CTGCGCCCCG TGTGGCTGGA GCCGCACCTC GACGGCCTCG ACAAGATGTA CCGCCTGCAC AAGTGGCTGG GCATCACCGC CTTGGTGGTG AGCGTGCTGC ACTGGTGGCT GGGCCGGGGC ACCAAGTGGA TGGTCGGCTG GGGCTGGCTG GTCCGCCCGG CCCGCGGCCC GCGCCCGACC GGCGACAAGG GCCTGATCGA AGGCCTGCTC GGCAGCCAGC GCGGCCTGGC CGAGACGGTC GGCGAGTGGG CCTTCTACGC CGCCGCGCTG CTGCTGGTGC TGGCCCTGAT CAAGCGTTTT CCGTACCGGC TGTTTGCCAA GACGCACACG TGGCTGGCCG CCATCTACCT GGCGCTGGTC TTCCATTCGG TGGTGCTGGT CAAGTTCGCC TACTGGGGCC AGCCGGTCGG TTGGGTGCTC GCGCCGCTGA TGGCCGCCGG CAGCGTGGCC GCGGTGCGGG TCCTGCTCGG CCGTGTCGGC GCGCGCCGCA AGGTCCAGGG CACGATCACG GCGCTGCGGC CCTACCCCGA GCTGGACGTG CTCGAGTCCC GCGTCACGCT GGCCGACGGC TGGCCCGGCC ACGCCGCCGG CCAGTTCGCC TTCGTGACCA CCGACCCGAA GGAAGGCGCG CACCCGTACA CCATCGCCTC GGCCTGGGAC GCGCAGACGC GCCAGATCAC CTTCATCACC AAGGCCCTGG GCGACCACAC CCGGCGCCTG CCCGAGTACC TGACGGTGGG CATGCCGGTG ACGGTGGAGG GCCCTTACGG CCGCTTCGAT TTCGAGGACG GCAAGCGCCG CCAGATCTGG GTCGGCGCGG GCATCGGCAT CACGCCCTTC ATCGCGCGCA TGCAGCAGCT CGCGGGCACG CCGGGGGCGG CGCAGATCGA CCTGTTCCAC CCGACCGCGG TCAGCGACCC GGTCGCACTG GAGAGGCTGA CCGCCGACGC CGCAGCAGCC GGCGTGCGCC TGCACGTGCT GGTCGACGCC GAACACGGCC GGCTCGACGG CACCCGCATC CGCGCCCTGG TGCCCGACTG GCGCGACGCC AGCCTGTGGT TCTGCGGCCC GGTCGGCTTC GGCCAGGCGC TGATGCGCGA CTTCGGCGCG CGTGGCCTGC CGCGCACCGC CTTCCATCAG GAGCTGTTCC ACATGCGCTG A
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Protein sequence | MQTYRVKQAF IAALVLLTGL WLLAEPQLPQ PLTYFGFRAV FMQYSGVIAI GVMSLSMLLA LRPVWLEPHL DGLDKMYRLH KWLGITALVV SVLHWWLGRG TKWMVGWGWL VRPARGPRPT GDKGLIEGLL GSQRGLAETV GEWAFYAAAL LLVLALIKRF PYRLFAKTHT WLAAIYLALV FHSVVLVKFA YWGQPVGWVL APLMAAGSVA AVRVLLGRVG ARRKVQGTIT ALRPYPELDV LESRVTLADG WPGHAAGQFA FVTTDPKEGA HPYTIASAWD AQTRQITFIT KALGDHTRRL PEYLTVGMPV TVEGPYGRFD FEDGKRRQIW VGAGIGITPF IARMQQLAGT PGAAQIDLFH PTAVSDPVAL ERLTADAAAA GVRLHVLVDA EHGRLDGTRI RALVPDWRDA SLWFCGPVGF GQALMRDFGA RGLPRTAFHQ ELFHMR
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