Gene Lcho_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2460 
Symbol 
ID6163349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2672009 
End bp2673592 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content73% 
IMG OID641665230 
Productaldehyde dehydrogenase 
Protein accessionYP_001791490 
Protein GI171059141 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000205723 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGACT CCACTGGCCA CAACTACATC GGTGGCGGCC GCAGCGCCGC CGGCGCCGTC 
ATCCTGCGCA GCCTGGACGC CACCACCGGC GAGCCGCTGC CGCCGAGTTT CGTGCAGGCC
ACGGCCGACG AGGTGGATGC CGCCGCCAGC GCTGCCGCCG CCGCGTTCCC GGTCTATCGC
AGCCTGTCGG CCGAGCGCCG GGCGCAGTTC CTGGACGCCA TTGCCGACGA GCTGGACGCG
CTGGACGACA CCTTCGTCGC CATCGTCTGC CGCGAGACCG CCTTGCCGGC GGCGCGCATC
CAGGGCGAGC GCGGCCGCAC CAGCGGCCAG ATGCGCCTGT TCGCCAAGGT GCTGCGGCGC
GGCGATTTCC ACGGCGCGCG CATCGACCGC GCGCTGCCCG ATCGCAAGCC GCTGCCGCGC
GTGGACCTGC GCCAGTGCCG CATCGGCGTG GGCCCGGTGG CGGTGTTCGG GGCGAGCAAT
TTCCCGCTGG CGTTCTCGAC CGCAGGCGGC GACACCGCCG CCGCGCTGGC CGCCGGCTGC
CCGGTGGTGG TCAAGGCGCA CAGCGGCCAC ATGGCCACGG CCGAGGGCGT GGCCGATGCC
ATCGTGCGCG CGGCGCAACG CACCGGCATG CCCGCCGGCG TGTTCAACAT GGTCTACGGC
AACGGCGTCG GCGAGTGGCT GGTCAAGCAC CCGGCGATCC AGGCGGTCGG CTTCACCGGT
TCCCTCAAAG GCGGCCGAGC CCTGTGCGAG ATGGCCGCGG CGCGGCCGCA GCCGATCCCG
GTGTTCGCCG AGATGAGCAG CATCAACCCG GTGCTGGTGC TGCCCGGTGC GCTGCAGGCG
CGCGGCGACC TGATCGCCCA GGATCTGGCG GCTTCGGTGG TGCAGGGGGC CGGGCAGTTC
TGCACCAACC CGGGCCTGGT GATCGGCATC CGCTCGGCCG CGTTCGACGC CTTTGTCGCG
CGCCTGTGCC AGCGCATGAG CGACGTGGCG CCGCAGACCA TGCTCAACGC CGGCACGCTG
CGCAGCTACT GCCACGGTCT GGACGCCTGG CTGGCGCATC CGGGCCTGAC GCGTCTGGCA
GGCCCCGAGC AGACCGGCGC GCAGGCCCGG GCCCAGGTCT TCAAGGCCGA CGCGAGCCTG
CTGCTGACGG GCGATGCGCT GCTGCAGGAG GAGGTCTTCG GCCCGGCGAC GGTGGTCGTC
GAGGTGGCGG ATCGGGCCGA ACTGATGCAG GCGCTGCACG GCCTGCGCGG CCAGCTGACG
GCCACGCTGA TCGGCGAGCC CGACGACCTG CTGGCCTCGA CCGACATCCT GGCGCTGCTG
GCGCACAAGG TCGGCCGCCT GCTGATCAAC GGCTACCCGA CCGGCGTGGA GGTCTGCGAC
GCGATGGTGC ACGGCGGCCC GTACCCGGCC ACGTCGGACG CACGCGGCAC GTCGGTGGGC
ACCCTGGCGA TCGACCGGTT CCTGCGTCCG GTCTGCTTCC AGAACTTCCC GGACGCCCTG
CTGCCCGACG CGCTGAAGAA CGACAACCCG CTGGGCATCG CCCGGCTGGT GGATGGCGCG
ATGACGCGCG AGCGTCTGGC CTGA
 
Protein sequence
MSDSTGHNYI GGGRSAAGAV ILRSLDATTG EPLPPSFVQA TADEVDAAAS AAAAAFPVYR 
SLSAERRAQF LDAIADELDA LDDTFVAIVC RETALPAARI QGERGRTSGQ MRLFAKVLRR
GDFHGARIDR ALPDRKPLPR VDLRQCRIGV GPVAVFGASN FPLAFSTAGG DTAAALAAGC
PVVVKAHSGH MATAEGVADA IVRAAQRTGM PAGVFNMVYG NGVGEWLVKH PAIQAVGFTG
SLKGGRALCE MAAARPQPIP VFAEMSSINP VLVLPGALQA RGDLIAQDLA ASVVQGAGQF
CTNPGLVIGI RSAAFDAFVA RLCQRMSDVA PQTMLNAGTL RSYCHGLDAW LAHPGLTRLA
GPEQTGAQAR AQVFKADASL LLTGDALLQE EVFGPATVVV EVADRAELMQ ALHGLRGQLT
ATLIGEPDDL LASTDILALL AHKVGRLLIN GYPTGVEVCD AMVHGGPYPA TSDARGTSVG
TLAIDRFLRP VCFQNFPDAL LPDALKNDNP LGIARLVDGA MTRERLA