Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2460 |
Symbol | |
ID | 6163349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2672009 |
End bp | 2673592 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641665230 |
Product | aldehyde dehydrogenase |
Protein accession | YP_001791490 |
Protein GI | 171059141 |
COG category | [C] Energy production and conversion |
COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000205723 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCGACT CCACTGGCCA CAACTACATC GGTGGCGGCC GCAGCGCCGC CGGCGCCGTC ATCCTGCGCA GCCTGGACGC CACCACCGGC GAGCCGCTGC CGCCGAGTTT CGTGCAGGCC ACGGCCGACG AGGTGGATGC CGCCGCCAGC GCTGCCGCCG CCGCGTTCCC GGTCTATCGC AGCCTGTCGG CCGAGCGCCG GGCGCAGTTC CTGGACGCCA TTGCCGACGA GCTGGACGCG CTGGACGACA CCTTCGTCGC CATCGTCTGC CGCGAGACCG CCTTGCCGGC GGCGCGCATC CAGGGCGAGC GCGGCCGCAC CAGCGGCCAG ATGCGCCTGT TCGCCAAGGT GCTGCGGCGC GGCGATTTCC ACGGCGCGCG CATCGACCGC GCGCTGCCCG ATCGCAAGCC GCTGCCGCGC GTGGACCTGC GCCAGTGCCG CATCGGCGTG GGCCCGGTGG CGGTGTTCGG GGCGAGCAAT TTCCCGCTGG CGTTCTCGAC CGCAGGCGGC GACACCGCCG CCGCGCTGGC CGCCGGCTGC CCGGTGGTGG TCAAGGCGCA CAGCGGCCAC ATGGCCACGG CCGAGGGCGT GGCCGATGCC ATCGTGCGCG CGGCGCAACG CACCGGCATG CCCGCCGGCG TGTTCAACAT GGTCTACGGC AACGGCGTCG GCGAGTGGCT GGTCAAGCAC CCGGCGATCC AGGCGGTCGG CTTCACCGGT TCCCTCAAAG GCGGCCGAGC CCTGTGCGAG ATGGCCGCGG CGCGGCCGCA GCCGATCCCG GTGTTCGCCG AGATGAGCAG CATCAACCCG GTGCTGGTGC TGCCCGGTGC GCTGCAGGCG CGCGGCGACC TGATCGCCCA GGATCTGGCG GCTTCGGTGG TGCAGGGGGC CGGGCAGTTC TGCACCAACC CGGGCCTGGT GATCGGCATC CGCTCGGCCG CGTTCGACGC CTTTGTCGCG CGCCTGTGCC AGCGCATGAG CGACGTGGCG CCGCAGACCA TGCTCAACGC CGGCACGCTG CGCAGCTACT GCCACGGTCT GGACGCCTGG CTGGCGCATC CGGGCCTGAC GCGTCTGGCA GGCCCCGAGC AGACCGGCGC GCAGGCCCGG GCCCAGGTCT TCAAGGCCGA CGCGAGCCTG CTGCTGACGG GCGATGCGCT GCTGCAGGAG GAGGTCTTCG GCCCGGCGAC GGTGGTCGTC GAGGTGGCGG ATCGGGCCGA ACTGATGCAG GCGCTGCACG GCCTGCGCGG CCAGCTGACG GCCACGCTGA TCGGCGAGCC CGACGACCTG CTGGCCTCGA CCGACATCCT GGCGCTGCTG GCGCACAAGG TCGGCCGCCT GCTGATCAAC GGCTACCCGA CCGGCGTGGA GGTCTGCGAC GCGATGGTGC ACGGCGGCCC GTACCCGGCC ACGTCGGACG CACGCGGCAC GTCGGTGGGC ACCCTGGCGA TCGACCGGTT CCTGCGTCCG GTCTGCTTCC AGAACTTCCC GGACGCCCTG CTGCCCGACG CGCTGAAGAA CGACAACCCG CTGGGCATCG CCCGGCTGGT GGATGGCGCG ATGACGCGCG AGCGTCTGGC CTGA
|
Protein sequence | MSDSTGHNYI GGGRSAAGAV ILRSLDATTG EPLPPSFVQA TADEVDAAAS AAAAAFPVYR SLSAERRAQF LDAIADELDA LDDTFVAIVC RETALPAARI QGERGRTSGQ MRLFAKVLRR GDFHGARIDR ALPDRKPLPR VDLRQCRIGV GPVAVFGASN FPLAFSTAGG DTAAALAAGC PVVVKAHSGH MATAEGVADA IVRAAQRTGM PAGVFNMVYG NGVGEWLVKH PAIQAVGFTG SLKGGRALCE MAAARPQPIP VFAEMSSINP VLVLPGALQA RGDLIAQDLA ASVVQGAGQF CTNPGLVIGI RSAAFDAFVA RLCQRMSDVA PQTMLNAGTL RSYCHGLDAW LAHPGLTRLA GPEQTGAQAR AQVFKADASL LLTGDALLQE EVFGPATVVV EVADRAELMQ ALHGLRGQLT ATLIGEPDDL LASTDILALL AHKVGRLLIN GYPTGVEVCD AMVHGGPYPA TSDARGTSVG TLAIDRFLRP VCFQNFPDAL LPDALKNDNP LGIARLVDGA MTRERLA
|
| |