| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2457 |
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| Symbol | |
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| ID | 6163346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2667980 |
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| End bp | 2669761 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665227 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001791487 |
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| Protein GI | 171059138 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00000103031 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAAGA CACCCCGCCG ACCCTTCCGC TCGCGCGAGT GGTTCGCCGA TCCCGCACGT
TCGGACATGA CCGCGCTCTA CCTCGAGCGC TTCATGAATT ACGGGCTCAC GCCCGAGGAG
CTGCGCTCGG GCCGGCCCAT CATCGGCATC GCGCAGACCG GCAGCGACCT GTCGCCGTGC
AACCGCATCC ACCTGGACCT GGCCCGGCGC GTGCGTGACG GCATCCGCGA TGCCGGCGGC
ATCCCGATGG AATTCCCGGT CCATCCGATC TTCGAGAACT GCCGCCGCCC GACTGCGGCG
CTGGATCGCA ACCTGGCCTA CCTGGGCCTG GTCGAGATCC TGTACGGCTA CCCGATCGAC
GCCGTGGTGC TGACCACGGG CTGCGACAAG ACCACGCCGG CGGGCGTGAT GGCCGCGTCC
ACGGTCGACA TCCCGGCCAT CGTGCTGTCG GGCGGGCCGA TGCTCGACGG CTGGCATGAC
GGCGAGCTGG TCGGCTCGGG CACCGTGATC TGGCGCAGCC GCCGCCAGCT CGCCGCCGGC
GAGATCGACG AAGAGGAATT CCTGCAGCGC GCCTGCAGCA GCGCGCCCTC GGCCGGCCAC
TGCAACACCA TGGGCACGGC CTCGACCATG AACGCGGTGG CCGAGGCGCT GGGTCTGTCG
CTGCCCGGCT GCGCGGCCAT TCCGGCGCCT TACCGCGAGC GTGGCCAGAT GGCTTACGAG
ACCGGCCGGC GCATCGTCGA GATGGCCTAC GAGGACCTGC GCCCGTCGCG CATCCTGACG
CGCGAGAGCT TCCTGAACGC GCTGTCGGTG ATCAGCTGCG CGGGCGGCTC CAGCAACGCG
CAGGTGCACA TCATGGCAAT GGCTCGCCAC GCCGGTGTCG AGCTGCAGCC GCAGGACTGG
ACCGCGCACG CCTACGACCT GCCGCTGCTG CTCAACATGC AGCCGGCGGG CAAGTTTCTG
GGCGAACGTT TCTTCCGTGC CGGTGGCGTG CCGGCGCTGA TGTGGGAGCT GCAGCAGGCC
GGCCGACTGC ACGGCGAGTG CCTCAGCGTC ACCGGCCGCA GCGTGGCCGA GAACCTGCAA
GGCCGCGAGA CCCGCGACCG CGAGGTGATC TACCCGTTCG ACGCGCCGCT GATGCACAAG
GCCGGCTTCC TGGTGCTGAG CGGCAACCTG TTCGATTTCG GCATCATGAA GACCTCGGTG
ATCTCGGCGC GCTTTCGCGA GCGCTACCTG AACCGGCCGG GCGCCGAGGG CATCTTCGAG
GGCCGCGCCG TGGTGTTCGA GGGCTCCGAC GACTACCACC ACCGCATCAA CGACCCGGCC
CTGGGCATCG ACGAAGACTG CATCCTGGTG ATGCGCGGCG CCGGCCCGAT CGGCTGGCCG
GGCTCGGCCG AGGTGGTCAA CATGCAGCCG CCCGACGCGC TGATCCGGCG CGGCATCATG
ACCCTGCCGA CGCTGGGCGA CGGCCGCCAG TCCGGCACCG CGGACAGCCC CTCGATCCTG
AACTGTTCGC CCGAGAGCGC GGTGGGCGGC GGCCTGAGCT GGCTGCGCAG CGGCGACCGG
ATCCGCATCG ACCTCAATAC CGGCCGTTGC GACGCGCTGG TGGCGCCCGA GGAGATCGAA
CGCCGCCGCC GCGAACTGCC CGCGCCGCCG ATCCCCAAGA GCCATTCGCC CTGGGAATCG
CTGTACCGCG AGAAGACCGG CCAGCTGGTC GACGGTGCGA CGCTGGACTT CGCGCTGGAC
TACCGGCGCA TCTCCGAGAC GACTCCGCGT CACAACCATT GA
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| Protein sequence | MDKTPRRPFR SREWFADPAR SDMTALYLER FMNYGLTPEE LRSGRPIIGI AQTGSDLSPC
NRIHLDLARR VRDGIRDAGG IPMEFPVHPI FENCRRPTAA LDRNLAYLGL VEILYGYPID
AVVLTTGCDK TTPAGVMAAS TVDIPAIVLS GGPMLDGWHD GELVGSGTVI WRSRRQLAAG
EIDEEEFLQR ACSSAPSAGH CNTMGTASTM NAVAEALGLS LPGCAAIPAP YRERGQMAYE
TGRRIVEMAY EDLRPSRILT RESFLNALSV ISCAGGSSNA QVHIMAMARH AGVELQPQDW
TAHAYDLPLL LNMQPAGKFL GERFFRAGGV PALMWELQQA GRLHGECLSV TGRSVAENLQ
GRETRDREVI YPFDAPLMHK AGFLVLSGNL FDFGIMKTSV ISARFRERYL NRPGAEGIFE
GRAVVFEGSD DYHHRINDPA LGIDEDCILV MRGAGPIGWP GSAEVVNMQP PDALIRRGIM
TLPTLGDGRQ SGTADSPSIL NCSPESAVGG GLSWLRSGDR IRIDLNTGRC DALVAPEEIE
RRRRELPAPP IPKSHSPWES LYREKTGQLV DGATLDFALD YRRISETTPR HNH
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