Gene Lcho_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2443 
Symbol 
ID6161863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2651779 
End bp2653197 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content68% 
IMG OID641665213 
Productphosphomannomutase 
Protein accessionYP_001791473 
Protein GI171059124 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.299376 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC TCGCATCGGC ATTCAAGGCC TATGACATCC GCGGCATCGT CGGGCAGGCG 
CTCGACGTCG AATTTGCCGA GCACCTCGGC CGTGCCTTCG GCAGCGAGGC GATCGCCGCC
GGCGAACGCG CGGTGGCGGT GGGCCGCGAC GGCCGCGTCT CCGGGCCGGA CCTGTCGGCG
GCGCTGATGC GCGGGCTGGC CTCGACCGGG CTGGATGTGG TCGACCTCGG CGCGGTGACC
ACGCCGATGC TCTATTACGT GGCCGCCACC CGCGGCGAAC ACGGTTGCCG CAGCGGCATC
CAGGTGACGG GCAGCCACAA CCCGAAGGAC TACAACGGCT TCAAGATGGT GCTGGCCGGC
GTGGCGATCC ACGGCGAGGC GATCCAGAAA CTGCGCACGC GCATGGAGGC CGAGGATTAC
CTGCACGTGC CCGGCAAGCG CAAGAACTCC AAGCCGCGCG TGGGCCGCAT CGCGGCGATG
GACATCCTGC CGGAATACAC GCACCGCGTC GTCAGCGACT GCAAGCTGGC GCGGCCGATG
AAGATCGTGG TCGACTCGGG CAACGGCATT CCGGGCGCCT CGGGGCCCGC CATCCTGCGG
GCGCTGGGCT GTGACGTGAT CGACATCTAC AGCCGCGTCG ACGGCGATTT TCCGAACCAC
CATCCCGATC CGTCCAAGCT CGAAAACCTG GCCGACCTGA TCAAGATCGT GCACGCCACC
GACGCCGAAC TCGGCCTGGC GTTCGACGGC GATGGCGACC GGCTGGGCCT GGTCACCAAG
GACGGCGAGA TCATCTTCCC GGACCGCCAG ATGCTGCTGT TCGCACGCGA CATCCTGAGC
CGGCACCCGG GCGGCACGAT CATCTTCGAC GTCAAGTGCT CGCAGCGCCT GTCGGCCGGC
ATTCTTGAAG CGGGCGGTGT GCCGCTGATG TGGAAGACCG GCCACTCGCT GGTGAAAGCC
AAGCTGCGCG AGACCGGCGC GCCGATCGCC GGTGAGATGA GCGGCCACAT CTTCTTCGGC
GAGCGCTGGT ATGGCTTCGA CGACGCGATG TACACCGCCG GCCGCCTGCT GGAGATCCTG
TCGCGCTTCG ACGACCCGAG CGCGGTGCTC AAGGCGCTGC CGACCAGCTT CAGCACGCCC
GAACTGAACG TCGCGGTGCC GGCCGGCAAC CAGCACCAGA TCGTCGAGGA GCTGATCGCT
CAAGCCGACT TTCCGGGTGC CACGATCGGC ACCATCGACG GCCTGCGGGG CGACTATCCG
GACGGCTTCG GCCTGATCCG GGCGTCGAAC ACCACGCCGG TGCTGGTGCT GCGTTTCGAG
GGCCACACCG AGGCGGCGCT GCATCGCATC GAAGGTGATT TCATGGCGGC GCTGCGCCGG
GTCATGCCTG AAGCGCAAGT GCAGCAGGCG GCGCACTGA
 
Protein sequence
MKTLASAFKA YDIRGIVGQA LDVEFAEHLG RAFGSEAIAA GERAVAVGRD GRVSGPDLSA 
ALMRGLASTG LDVVDLGAVT TPMLYYVAAT RGEHGCRSGI QVTGSHNPKD YNGFKMVLAG
VAIHGEAIQK LRTRMEAEDY LHVPGKRKNS KPRVGRIAAM DILPEYTHRV VSDCKLARPM
KIVVDSGNGI PGASGPAILR ALGCDVIDIY SRVDGDFPNH HPDPSKLENL ADLIKIVHAT
DAELGLAFDG DGDRLGLVTK DGEIIFPDRQ MLLFARDILS RHPGGTIIFD VKCSQRLSAG
ILEAGGVPLM WKTGHSLVKA KLRETGAPIA GEMSGHIFFG ERWYGFDDAM YTAGRLLEIL
SRFDDPSAVL KALPTSFSTP ELNVAVPAGN QHQIVEELIA QADFPGATIG TIDGLRGDYP
DGFGLIRASN TTPVLVLRFE GHTEAALHRI EGDFMAALRR VMPEAQVQQA AH