| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2442 |
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| Symbol | |
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| ID | 6161862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2650448 |
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| End bp | 2651764 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641665212 |
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| Product | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein |
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| Protein accession | YP_001791472 |
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| Protein GI | 171059123 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.66244 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCAC TCAAGCGCGG TCTGGCGCGG CTGGCCTACA GCACGCTGCT GCGCGGGCTC
ACGCCGCTGC TGCTGGCGCG GCTGTTCTGG CGCGCGCGGC GTGAGCCGCC GTATGGCCAG
GCGATCGGCG AGCGGCTCGG TTTCGGCGCG CCCACCAAAC CGGGCGCGCT ATGGCTGCAC
GCGGTCTCGC TCGGTGAAAC CCGCGCCGCC GAGCCGCTGA TCCAGGCCTT GCGCGCGGCC
CGGCCTGGGC TGCGGCTGCT GCTCACGCAC GGCACCGCCA CCGGCCGCGA GACCGGCGCG
GCGCTGCTGC GCGCCGGTGA CGCGCAACGC TGGCTGCCGT TCGACACCCC CGGCGCGGTG
CGGCGTTTCC TGCGCCGCCA TCGGCCGGCC ATCGGCGTGC TGATGGAGAC CGAGGTCTGG
CCGAACCTGC AGGCCGAGGC GCTGGCCGCC GGTGTGCCGA TGGTGCTGGC CAACGCACGG
CTGTCGGACA AGAGCCTGCG CAAGTCGCTG CGGCTCGACG CGTTGATGCG GCCGGCGGTC
GAGGCGCTGT CCACGGCGCT GGCGCAGACC GAGGACGACG CCCGGCGCCT GCGCGAAGCC
GGCGCCCGCG ACGTGCAGGT GTGCGGCAAC ATCAAGTTCG ACCTGCGCCC CGACCCGGCC
TTGCTGACGC GCGGCCGGCA CTGGCGTGTT GCTGCAGCCG GCCGGCCGAT CGTGCTGGCG
GCGAGCTGGC GCGAAGGCGA GGACGAGCCC CTGCTGCAGG CCTGGGCCGC GATGCTGGCG
CAATCCGACC CGTCAGCCCG CCGCCCCGTG CTGGCGCTGG TGCCGCGCCA TCCGCAGCGT
TTCGACGAGG TGGCGGCGCT GGTGCAGGCC GCGGGGCTGA CGCTGTCTCG ACGCAGCAGC
TGGGGCGAGG GCGACGCCGC GGTGCCCGAT GCGGCGGCGC AGGCCGACGT CTGGCTGGGC
GACTCGATGC GCGAGATGCC GGCCTATTAC GCGCTGGCCG ACGTGGCGCT GCTGGGCGGC
AGTTTCGCGC CGCTGGGCGG CCAGAACCTG ATCGAGGCGG CCGCCTGCGG CTGCCCGGTG
GTGATGGGGC CGCACACCTT CAACTTTGCC GACGCGGCCC AGCTGGCCGA GGCCCAATCG
GCCGCGCGTC GGGTGCCGGC GATCGGCAAC GGCGTGGCGT TGGCGGTCGC GCAGGCCGGT
GACGTGTCGG CCCACGCGCA GGCCTCGGCC GCGGCCCTGG CCTACGCCGC GGCGCACCAG
GGCGCGTCCG AACGCATGGC GGCGATCCTG CTGAAACAGG CGCGCTGGCC GGGCTGA
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| Protein sequence | MIALKRGLAR LAYSTLLRGL TPLLLARLFW RARREPPYGQ AIGERLGFGA PTKPGALWLH
AVSLGETRAA EPLIQALRAA RPGLRLLLTH GTATGRETGA ALLRAGDAQR WLPFDTPGAV
RRFLRRHRPA IGVLMETEVW PNLQAEALAA GVPMVLANAR LSDKSLRKSL RLDALMRPAV
EALSTALAQT EDDARRLREA GARDVQVCGN IKFDLRPDPA LLTRGRHWRV AAAGRPIVLA
ASWREGEDEP LLQAWAAMLA QSDPSARRPV LALVPRHPQR FDEVAALVQA AGLTLSRRSS
WGEGDAAVPD AAAQADVWLG DSMREMPAYY ALADVALLGG SFAPLGGQNL IEAAACGCPV
VMGPHTFNFA DAAQLAEAQS AARRVPAIGN GVALAVAQAG DVSAHAQASA AALAYAAAHQ
GASERMAAIL LKQARWPG
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