Gene Lcho_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2438 
Symbol 
ID6163644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2647157 
End bp2647501 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content69% 
IMG OID641665208 
Productrhodanese domain-containing protein 
Protein accessionYP_001791468 
Protein GI171059119 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.517598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAG TCGCCGTCCG GGACATCGCC GCCCTGCTCG ACACCTGGCG CGGCCAGGGC 
CTCAGGCCCG CGCTGCTGGA CGTGCGCGAA GCCTGGGAAG TGGCCACCGC CAGCCTGAGC
CTGCCGGGCG TCGAGACCCG CTGCATCCCG ATGCAGCAGG TGCCGGCCCG CCATGCCGGC
GAGCTCGATG CCGCGCAGCC GCTGCTGGTG CTGTGCCACC ACGGCATGCG CAGTCTGCAG
GTGGCGATGT ACCTGGATGG GCAAAGATAC CCCCATGTGT ATAACATCGC GGGTGGCATC
GACGCCTGGT CGCGCGTTGT CGATCCGACG GTGCCGACCT ACTGA
 
Protein sequence
MQQVAVRDIA ALLDTWRGQG LRPALLDVRE AWEVATASLS LPGVETRCIP MQQVPARHAG 
ELDAAQPLLV LCHHGMRSLQ VAMYLDGQRY PHVYNIAGGI DAWSRVVDPT VPTY