| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2437 |
|---|
| Symbol | |
|---|
| ID | 6163643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Leptothrix cholodnii SP-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010524 |
|---|
| Strand | + |
|---|
| Start bp | 2646474 |
|---|
| End bp | 2647127 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641665207 |
|---|
| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| Protein accession | YP_001791467 |
|---|
| Protein GI | 171059118 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.694164 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGTCG AACAGGCCCG CTTCAACATG ATCGAGCAGC AGATCCGCCC CTGGGATGTG
CTGGACAGCT CGGTGCTGTC GCTGCTGGCG GTGGTCAAGC GCGAAGATTT CGTGCCCGCC
GCACACCGCA GCGTCGCCTT CATGGACCTG GAGGTGCCGC TGCCCGGCGG CCAGTCCATG
CTCGCCCCGC GCCTCGAGGC CCGCCTGCTG CAGGACCTCG CCCCGCACCG CCACGAGAAG
GTGCTTGAGA TCGGCACCGG CTCGGGCTTC ATGGCCGCGC TGCTGGCGCA CAAGGCGCAG
CAGGTCGTCA GCCTCGAGAC CCGCCCCGAG CTGGTCGCGA TGGCACGCGA GAACCTGCGC
CACGCCAAGA TCATGAACGC CGAGGTGCGC CAGGCCGACG GCTCCGATGC CAAGGCCGTC
GCCGGTCCGT GGGACGCCAT CGTGCTGTCG GGCTCGGTGG CCGAAGTGCC CGCCGCGCTG
CTGCAGCAAC TCAAGGTCGG TGGCCGGCTG GTCGCCGTGG TCGGCCAGGC CCCGATGATG
CGGGCCACCC GCGTCACCCG CACCGGCGAG CGCGATTTCC GCACCGAGGT GCTGTTCGAC
ACCGTCGCGC CCCGGCTCGA CGGTTTCGGC GAACCCTCGC GTTTCTCGTT CTGA
|
|---|
| Protein sequence | MNVEQARFNM IEQQIRPWDV LDSSVLSLLA VVKREDFVPA AHRSVAFMDL EVPLPGGQSM
LAPRLEARLL QDLAPHRHEK VLEIGTGSGF MAALLAHKAQ QVVSLETRPE LVAMARENLR
HAKIMNAEVR QADGSDAKAV AGPWDAIVLS GSVAEVPAAL LQQLKVGGRL VAVVGQAPMM
RATRVTRTGE RDFRTEVLFD TVAPRLDGFG EPSRFSF
|
|---|
| |