Gene Lcho_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2432 
Symbol 
ID6161013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2641556 
End bp2641807 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content71% 
IMG OID641665202 
Productthiamine biosynthesis protein ThiS 
Protein accessionYP_001791462 
Protein GI171059113 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2104] Sulfur transfer protein involved in thiamine biosynthesis 
TIGRFAM ID[TIGR01683] thiamine biosynthesis protein ThiS 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.660547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TCGAAACGAT CGCTGCCGTC GATCCGTCGA TCGCCGTCAC CTTGAACGGC 
GCGCCTTGCC AGGTCGACGC CGGCACGCCG CTGGGCGAAC TGCTCGCCCG GCACCCCGAG
ACCGCCACGC TCGCGCCGCA GGCCTACGCC AGCGCCGTCA ACGGCGCGTT CGTGGCGCGC
GCCAGACGCG AGCGACACAT GCTGCAGGCG GGCGACGCGG TCACGGTCTT CCAGGCCATC
GTCGGAGGTT GA
 
Protein sequence
MKTLETIAAV DPSIAVTLNG APCQVDAGTP LGELLARHPE TATLAPQAYA SAVNGAFVAR 
ARRERHMLQA GDAVTVFQAI VGG