| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2427 |
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| Symbol | |
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| ID | 6164136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2635021 |
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| End bp | 2636820 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641665197 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein |
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| Protein accession | YP_001791457 |
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| Protein GI | 171059108 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.250716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCGC TGCCCGACGA TCCAGCCTCG CTGCCTGCCG AATGTGACCT GCTCGTGATC
GGCTCGGGCG CGGGCGGCCT GAGCGCCGCC GTCACCGCCG CCTGGTTCGG GCTCGACGTG
GTGGTGGTCG AGAAGGAGCC GGTGCTCGGC GGCACCACCG CCTGGTCGGG CGGCTGGATG
TGGGTGCCAC GCAACCCGCT GGCTCGCGCG GCGGGCATGG CCGAAGACCT CGCGCCGGTG
CGCGCCTACC TGCGCCACAT CCTCGGCGCG CAGTACGACG CCGCGCGCAT CGAGGCCTTG
CTGACGCACG GGCCGGCGAT GGTGCAGTTC CACCTCGAGC ACACCGCCTT GCGTTTCATC
GACGGCCACC AGGTGCCCGA TTTCCGCGGC GATGCGCCGG GTGCGCGCAC CGGCGGGCGC
TCGGTCTGCG CCGCGCCGTT CGACGCCCGC GTGCTGGGCG CCGACCTGAA GCGCCTGCGC
GCGCCGCTCG ACATCCTGAG CTTCCTCGGC ATGGGCATCG GCGGGGGTGC GGATCTGCGG
CACTTCCTGC GTGTCACGCG GGCCTTCGAT TCGTTCTCGT ACGTCACCCG GCGGCTGTTG
CGGCACTTCC GCGACGTGCT GCTGCACGGC CGCGGCACCG TGCTGATGGG CGGCAACGCG
CTGGCCGGCG CGCTGCTGAA GTCGGCGCTC GAACGCGGCG TGAAGCTGTT CACCGGCCTG
GCTGCGAGCG AGCTGATCCG CGATCAGGGT CGCGTCACGG GCGCCGTGCT GCGCTCGGCC
GACGGCCAGA CGCGCAGCGT GCGTGCGCGC CGCGGCGTGG TGCTGGCCAC CGGCGGTTTC
CCGCACGACG TGCAGCGCAA GAAGGCGCTG TTCGCGCACG CACCGAGCGG TCACGAGCAC
TGGTCGGCCG CGCCGCCGAC CAACACCGGC GACGGCCTGC GGCTGGCCGA GGCGGTGGGC
GCACGCATCG ACGTGGGCGC CCACGCCGGG GCCTGGGCGC CGGTGTCGCT GGTGCCGCGG
CGTGACGGCA GCGTCGGCCA CTTTCCGCAC CTGGTCGATC GCGGCAAGCC GGGGCTGATC
GCGGTCAATG CGCGCGGCCA GCGTTTCGTC AACGAGGCCG GCAGCTATCA CGACTTCATG
AACGCGCTGT TCGCCGGCAC GCCCGCCGGC GAGGCGCCGG TGGCCTGGCT GGTGGTCGAC
CACCGCTTCC AACGCCGCTA CGGCCTGGGC CACAGCAAGC CGTGGCCGCT GCCGCTGGGC
GGACATCTGC GCAGCGGCTA CCTGCAGCGC GGGCACAGCT TCGAAGAGCT GGCGCAGCGC
TGCGGCATCG ATCCGGCCGG CCTGGCGCGC ACGGTGGCGC ACTACAACCC GGCCGCCCGC
GAAGGCCGAG ACCCCGCCTT CGGCCGCGGC AGCACGGCCT ACAACCGCAT GCAGGGCGAC
GCCGAACACG CCGGCACCAA CCCCTGCGTG GCGCCGATCG AGGACGGGCC GTATTACGCC
GTCAAGGTCG TGCCGGGCAG CCTCGGCACC TTCGCCGGCC TGGCCGCCGA TGCGCACGCC
CGCGTGCTCG ACGCGCGCGG CGCGCCGATC CCCGGCCTCT ACGCCTGCGG CAACGACATG
GCCAGCGTGA TGGGCGGCCA TTACCCGAGC GGCGGCATCA CGCTCGGGCC GGCAATGACC
TTCGGCTACG TGCTGGCGCA CCACGTCGCC GGCCATGCGC TGGTGACGCC GCCGGCGCCG
GTCGATGCCG GCGACACCGG TCCCGACAGC ATGGCGCGAT TCACCGCCCG GGCGGCCTGA
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| Protein sequence | MNPLPDDPAS LPAECDLLVI GSGAGGLSAA VTAAWFGLDV VVVEKEPVLG GTTAWSGGWM
WVPRNPLARA AGMAEDLAPV RAYLRHILGA QYDAARIEAL LTHGPAMVQF HLEHTALRFI
DGHQVPDFRG DAPGARTGGR SVCAAPFDAR VLGADLKRLR APLDILSFLG MGIGGGADLR
HFLRVTRAFD SFSYVTRRLL RHFRDVLLHG RGTVLMGGNA LAGALLKSAL ERGVKLFTGL
AASELIRDQG RVTGAVLRSA DGQTRSVRAR RGVVLATGGF PHDVQRKKAL FAHAPSGHEH
WSAAPPTNTG DGLRLAEAVG ARIDVGAHAG AWAPVSLVPR RDGSVGHFPH LVDRGKPGLI
AVNARGQRFV NEAGSYHDFM NALFAGTPAG EAPVAWLVVD HRFQRRYGLG HSKPWPLPLG
GHLRSGYLQR GHSFEELAQR CGIDPAGLAR TVAHYNPAAR EGRDPAFGRG STAYNRMQGD
AEHAGTNPCV APIEDGPYYA VKVVPGSLGT FAGLAADAHA RVLDARGAPI PGLYACGNDM
ASVMGGHYPS GGITLGPAMT FGYVLAHHVA GHALVTPPAP VDAGDTGPDS MARFTARAA
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