| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2419 |
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| Symbol | |
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| ID | 6163793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2626274 |
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| End bp | 2627416 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641665189 |
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| Product | histidine kinase |
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| Protein accession | YP_001791449 |
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| Protein GI | 171059100 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4585] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.437374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCAC CGATCCCCCA CGCCGCCCGG GTGACACCGC ACGACGACAC CGAACTCAAG
CGTGCGCAGA CCGAACTGAT GCGCTCGCAG GACGTCCTGC GGCGCCTGGC CGCGGGGCTC
GACAGCGTGC AGGAAAACGA GCGGCGGCGC ATCGCCAGCG AGCTGCACGA CGACCTGCAG
CAGACGCTGG CGGCGATCGG CCTGGAGGTG GGCGCGATCC GCGGCCAGCT TGCGGCGCAG
GCGTGCGACC TCACCGCTCG GCTGGACACC GTGCGCGAGC TGGCGATCAC CGCCATCGCC
GCGACCCGGC GCATCGTCAA CGACCTGCGG CCGCCGATCC TCGAGGAGCT CGGGCTGGCG
GCCGCGCTCG ATGCGCTGGT GGCCCAGGTG GCGCGGCGCA CCGGCATGCG CTGCCGATTC
CAGACCGACG AAGACACCGA TGCGGAACTG GCGCCGGCGG TGGTCACCTC GCTGTACCGC
ACCGCCCAGC AGGCGCTGAG CAACGTGACC CGCCACGCCG GCGCGAGTGC CGTGACGGTG
CAGCTGCAGC GCGACGGCGG CCGTGGCGTC CTGCTGCGCA TCGCCGACAA CGGCCGCGGC
ATGGCGGTGG ACGATCGGCG CCGGCCGTTC ACGGTCGGCC TGCTGTCGAT GCAGGAGCGC
TTGCGCGCGC TGGGCGGCGA GCTGCGGCTC GAAAGCCGGC TGGGTGCGGG CACCACCGTC
GAGGCGCGAG CGCCCAGCAC GCCCGCGGCA GCGACTTCGC CGCAATCGCT GGTGGTGGGC
ATCCCCCGGG AGCCCGACGA TGACCTGCTG CGGTTTCTCC ACCGCGCCCC GGTGGGCCTG
GTGCAGGCCG CGCTGGACGG ACAGATCGAG ATGCTCAATC CGACGGCCAC CCGCTTGCTG
ATGCCGTTTT CAACCGATGG TCGCCTGGAC AACCTGTTCG GCGTGCTCAA GCAGGCGGTG
CCGCATCTGC GCCACCTGAG CGCCCAGGTC GAGCCCCCGT CAGGCGTGGT GTGCGAGTCG
CTGCGCATCG AACTCGCGCC GCAGGGCGAG CGCGGCGCCG TGCAGGCGTT GTCGCTCAGC
ATGCTGAAAC AGGCTGGCGG GCGCCTGATG GCCGTGCTCG GCCCGGCCGA GCCGGACCGG
TAG
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| Protein sequence | MPPPIPHAAR VTPHDDTELK RAQTELMRSQ DVLRRLAAGL DSVQENERRR IASELHDDLQ
QTLAAIGLEV GAIRGQLAAQ ACDLTARLDT VRELAITAIA ATRRIVNDLR PPILEELGLA
AALDALVAQV ARRTGMRCRF QTDEDTDAEL APAVVTSLYR TAQQALSNVT RHAGASAVTV
QLQRDGGRGV LLRIADNGRG MAVDDRRRPF TVGLLSMQER LRALGGELRL ESRLGAGTTV
EARAPSTPAA ATSPQSLVVG IPREPDDDLL RFLHRAPVGL VQAALDGQIE MLNPTATRLL
MPFSTDGRLD NLFGVLKQAV PHLRHLSAQV EPPSGVVCES LRIELAPQGE RGAVQALSLS
MLKQAGGRLM AVLGPAEPDR
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