| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2416 |
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| Symbol | |
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| ID | 6163790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2622784 |
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| End bp | 2623977 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665186 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001791446 |
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| Protein GI | 171059097 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.186269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACCCC TCCAAGGCCT GACCGTCGTC ACGCTCGAGC ACGCCATCGC CGCGCCGTTC
GCCACCCGCC AGCTCGCCGA CCTGGGCGCG CGCGTGATCA AGATCGAACG CCCCGGCAGC
GGCGATTTCG CGCGCGGCTA CGACGCGCGG GTGCGCGGCC TGGCGTCGCA CTTCGTCTGG
ACCAATCGCT CGAAGGAGAG CCTGACGCTC GACGTCAAGC ACCCCGAGGC GGCCCAGGTG
CTGGAGCGCC TGGTGCTCGA GAAGGCCGAC GTGGTGGTGC AGAACCTCGC ACCCGGCGCC
GCCGCGCGGC TGGGCCTGGG CCACGAGCGG CTGGCCGCAC GCAAGCCCGG CATCATCGTG
TGCGACATCT CGGGCTACGG CGCCGACGGC CCCTACCGCG ACAAGAAGGC CTACGACCTG
CTGATCCAGA GCGAGGCCGG TTTCGTGTCC GTCACCGGCA CGGCCGACGA GCCCTGCAAG
GCCGGCCCGT CGATCGCCGA CATCGCCGCG GGCATGTACG CCTACACCCA GATCCTGGCC
GCGCTGCTGC AGCGCAGCCA GACCGGCCGT GGCCAGCACA TCGACATCTC GATGCTCGAA
TCGCTGGCCG AGTGGACCAG CTATCCGCTG TACTACGCCT TCGACGGCGC GCCGCCTCCG
CCACGCACCG GCGCTGCCCA CGCCACGATC TACCCCTACG GCCCGTTTCC CACCGGCGCC
GACGGCGGCA GCGTGATGCT CGGCTTGCAG AACGAACGCG AGTGGGTCAA CTTCTGCGAC
AAGGTGCTGC TGCAGCCGGC ACTCGCCCGG GATCCGCGCT TTGCCGGCAA CGCCCGGCGG
GTGGCCGAAC GGGCGGCGCT GCGCGCGCTG ATCGTCGAGA CCTTCACGCC GTTGACCGCG
CCGCAGGTGG TGGAGCGGCT CGAGGCCGCG CAGATCGCCA ACGCCCGCGT CAACACGATG
CACGACGTCT GGAACCACCC GCAGCTGCAG GCACGCGGCC GCTGGCGCGA GGTCGGCTCG
CCCGCCGGCC CGCTGCCAGC AATGCTGCCG CCGGGCTCGT GGGGGCCAGA TGCCGCCGAC
GGCCCGCGCA TGGACCCGGT GCCGGCACTC GGTGAACACA CCGATGCGAT CCTGCGCGAG
CTGGGCCTCG ACGCCGACGC CATCGCGGCG CTGCGCAGGG CCGAGGCGAT CTGA
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| Protein sequence | MQPLQGLTVV TLEHAIAAPF ATRQLADLGA RVIKIERPGS GDFARGYDAR VRGLASHFVW
TNRSKESLTL DVKHPEAAQV LERLVLEKAD VVVQNLAPGA AARLGLGHER LAARKPGIIV
CDISGYGADG PYRDKKAYDL LIQSEAGFVS VTGTADEPCK AGPSIADIAA GMYAYTQILA
ALLQRSQTGR GQHIDISMLE SLAEWTSYPL YYAFDGAPPP PRTGAAHATI YPYGPFPTGA
DGGSVMLGLQ NEREWVNFCD KVLLQPALAR DPRFAGNARR VAERAALRAL IVETFTPLTA
PQVVERLEAA QIANARVNTM HDVWNHPQLQ ARGRWREVGS PAGPLPAMLP PGSWGPDAAD
GPRMDPVPAL GEHTDAILRE LGLDADAIAA LRRAEAI
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