Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2403 |
Symbol | |
ID | 6161415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2609844 |
End bp | 2611154 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641665173 |
Product | phenylacetate-CoA ligase |
Protein accession | YP_001791433 |
Protein GI | 171059084 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.670369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTCA AACAACCTGC CCCCGGCGAC CTCGAGCCGA TCGAAACCGC CAGCCGCGAC GAACTGCAGG CGCTGCAACT GCAACGCCTG CGCTGGACGC TGCAGCACGC CTACGACAAC GTCGCGCACT ACCGCCAGGC TTTCGATGCC AAGGGCGTGC ATCCGTCGGA CCTGAAGACG CTGGCCGACC TGGCCAAGTT CCCGTTCACG GCCAAGGCGA CGCTGCGCGA CAACTACCCG TTCGGACTCT TCGCGGTGCC GCGCGAGCAG GTGTCGCGGG TGCATGCGTC GTCGGGCACC ACCGGCAAGC CGACGGTGGT GGGCTACACG AAACGCGACA TCGACAACTG GGCCGACCTG GTGGCGCGCT CGATCCGCGC CGCGGGCGGG CGGGCCGGCG ACATCGTGCA CATCGCGTAC GGCTACGGCC TGTTCACCGG CGGGCTGGGC GCGCACTACG GTGCCGAGCG GCTGGGCTGC ACGGTGATCC CGATGAGCGG CGGCCAGACC GAGAAGCAGG TCCAGCTGAT CAGCGATTTC AAGCCGGACA TCATCATGGT GACGCCGAGC TACATGCAGG TGATCGTGGA AGAGATGCGC CGCCAGGGGC TCGATCCCGC GGCCAGTTCG CTGAAGGTCG GCATCTTCGG CGCCGAACCC TGGACCGAGG CGATGCGCCG CGAGATCGAG GCCAGCGCCG GCATCGATGC GGTCGACATC TACGGTCTCA GCGAGGTGAT GGGCCCGGGC GTGGCCAGCG AGTGCATCGA GAGCAAGGAC GGCCCGGTGA TCTGGGAGGA CCATTTCTAC CCCGAGATCA TCGACCCGGT CACCGGCGAG GTGCTGCCCG ACGGCAGCGA AGGCGAGCTG GTCTTCACCA CGCTGACCAA GGAGGCGCTG CCGGTGATCC GCTACCGCAC GCGCGACCTC ACGCGCCTGC TGCCACCCAC CTCGCGCAGC ATGCGCCGCA TCGGCAAGAT CGTCGGCCGC AGCGACGACA TGCTGATCAT CCGCGGCGTC AACGTCTTCC CGACCCAGAT CGAGGAGATC GTGCTGCAGC ACGGTCAGCT CGCCGGCCAG TACCAGCTGA TCGTGACGCG CAGCGGCCAT CTGGACGAGC TCGAGGTGCG CTGCGAGCGC CTGCCCGGCA CCAGTGCCGA AGTGGGCGAC GAGGCCGCGC GCTGGCTGCA GCAGCGCATC AAGACGCTGG TCGGCGTGAC CGCGAGCGTG ATCGTGGGTG ACGCCGACAG CATCGAGCGC ACGCTGGTCG GCAAGGCGCG GCGGGTGATC GATCGCCGGC CGCGACAATG A
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Protein sequence | MPVKQPAPGD LEPIETASRD ELQALQLQRL RWTLQHAYDN VAHYRQAFDA KGVHPSDLKT LADLAKFPFT AKATLRDNYP FGLFAVPREQ VSRVHASSGT TGKPTVVGYT KRDIDNWADL VARSIRAAGG RAGDIVHIAY GYGLFTGGLG AHYGAERLGC TVIPMSGGQT EKQVQLISDF KPDIIMVTPS YMQVIVEEMR RQGLDPAASS LKVGIFGAEP WTEAMRREIE ASAGIDAVDI YGLSEVMGPG VASECIESKD GPVIWEDHFY PEIIDPVTGE VLPDGSEGEL VFTTLTKEAL PVIRYRTRDL TRLLPPTSRS MRRIGKIVGR SDDMLIIRGV NVFPTQIEEI VLQHGQLAGQ YQLIVTRSGH LDELEVRCER LPGTSAEVGD EAARWLQQRI KTLVGVTASV IVGDADSIER TLVGKARRVI DRRPRQ
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