| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2397 |
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| Symbol | |
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| ID | 6160887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2603124 |
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| End bp | 2603822 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641665167 |
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| Product | lipoprotein releasing system, ATP-binding protein |
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| Protein accession | YP_001791427 |
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| Protein GI | 171059078 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR02211] lipoprotein releasing system, ATP-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACA GCGTGAACCA CGCGGTGCTG AAGGCCACCG GCCTGGTGCG GCGCTACCAC
GAGGGCGGCG ACGACGGGCT CGACGTCACC GTGCTGCGCG GTGTCGACCT GACCATCTCG
CGCGGCGAGA TCGTCGCGGT GGTGGGGGCC TCGGGCTCGG GCAAGAGCAC CTTGCTGCAC
CTGATGGGCG GGCTCGACGC GCCCACCAGC GGCGAGGTCA TGCTGATGGG CCGCCGCCTG
GCCGGGCTGA ACGCCACCGA GCAGGGCCGC TGGCGCAACC GCCACCTCGG GTTCATCTAT
CAGTTCCACC ACTTGCTGCC CGAGTTCAGC GCGCTCGATA ACGTGGCGAT GCCGCTGTTG
ATCCGGCGTG GCTCGATGGC CGATGCACGC GAGGCGGCGC AGGCGATGCT GGCGAGCGTG
GGCCTGGCCG CGCGCACGCG GCATCGGCCC AGCGAGCTGT CGGGCGGCGA GCGCCAGCGG
GTGGCGATCG CGCGGGCGCT GGTCAGCCAG CCGGCCTGCG TGCTGGCCGA CGAACCCACC
GGCAACCTCG ACCGCGAAAC CGCCGCCCAG GTGTTCGAGC TGATGCTCGA CCTGGCGCGC
CGCCAGGGCA CGGCCTTCGT GCTGGTCACG CACGACACCA CGCTGGCCGC GCGCTGCGAC
CGCGTGCTGC GGCTCGACAA GGGTTCGATC GTTCCCTGA
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| Protein sequence | MNDSVNHAVL KATGLVRRYH EGGDDGLDVT VLRGVDLTIS RGEIVAVVGA SGSGKSTLLH
LMGGLDAPTS GEVMLMGRRL AGLNATEQGR WRNRHLGFIY QFHHLLPEFS ALDNVAMPLL
IRRGSMADAR EAAQAMLASV GLAARTRHRP SELSGGERQR VAIARALVSQ PACVLADEPT
GNLDRETAAQ VFELMLDLAR RQGTAFVLVT HDTTLAARCD RVLRLDKGSI VP
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