Gene Lcho_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2394 
Symbol 
ID6160884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2601517 
End bp2602140 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content73% 
IMG OID641665164 
ProductATP binding protein 
Protein accessionYP_001791424 
Protein GI171059075 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCC TTTTGCGCCC CCTGTCGCGC CCGGCCCTGC GGCCCCTGAT CGGCGACAGC 
CTGAGCGATC GCGTCACCTT CGTCGGCCCC TACGGCGTGG GCAAGACCAC CGCCTTGCGC 
GCGGTGTCGG ACATCCCGGT GCTCGACACC GACGTGCCGA TGACACGCGA ACAGCTCGGC 
GCGGACAGCC ACAAGACCCG CACCACCGTC GGTTTCGACT ACGGCGAGTG GCAGTTCGGC 
GATGGCTCGC GCATCAGCCT GTGCGGCCTG CCGGGGCAGG AGCGCTTCGA TGCCGTCTGG 
GACGCGTTGC TGCCGCAGAG CAGTGGCGTG GTGCTCTGGC TGTTCGGCGA CCGGCCCGGC 
GGCAGCGCCG AGGGCGTGGC CGAAATGGCC CGCTGGGTCA GCGCGATCGC CGCGCGGGTG 
CCGGTGGTGC GGCTGGCGGT GGCGATCACC CGCCTGCCGG CCGGTTTTGC CGACAGCGCG 
CTCGACCCCT ACCGCGACGC ACTGCAGGCC TGGCATCCGA TGGCACCGGT GCTGTCGGCC 
GATCCGCGCA GCGCAGCCGA CGTGCGGCAG GTCATCGCCG TGTCGCTGGC CAGCCCCGCG 
GCGGCCGTGA CGGCGGTGGC CTGA
 
Protein sequence
MTSLLRPLSR PALRPLIGDS LSDRVTFVGP YGVGKTTALR AVSDIPVLDT DVPMTREQLG 
ADSHKTRTTV GFDYGEWQFG DGSRISLCGL PGQERFDAVW DALLPQSSGV VLWLFGDRPG 
GSAEGVAEMA RWVSAIAARV PVVRLAVAIT RLPAGFADSA LDPYRDALQA WHPMAPVLSA 
DPRSAADVRQ VIAVSLASPA AAVTAVA