| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2383 |
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| Symbol | |
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| ID | 6160086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2589074 |
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| End bp | 2590357 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665152 |
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| Product | integrase family protein |
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| Protein accession | YP_001791413 |
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| Protein GI | 171059064 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCG ACACCGAATG CAGGAACGCC AAGTGCCCAG AGGGTCGCGC GTTCGTTCGT
CTCGCCGATG CCGGCGGCCT CTACCTCGAG GTCAAGCCGC CGGGCGCCAA GACGCCCAGC
GGCTCCAAGC TCTGGCGCTG GAAGTACCGG CACGGTGGCA AGGAGAAGCT GCTGGCGATC
GGCGCCTATC CCGCCGTCAG CGTTGCCGGA GCCAGGCGCG AACAGGCCAA GGCGCGCGCG
CTGCTCGATG CCGGCACCGA CCCCGGCGAG GCCCGCAAGG AGGCCAAGTA CGCCAAGCTG
AACGAGCACG AAACGTCCTT CGAGGCCGTG GCGCGTCAGT GGTGGGCAGG CTGGAAGGCG
AACAAGACCG AGCGTTACGC CGAATACGTG CTGCGGCGCC TCGAACTCGA CGCCTTCCCG
GTGATCGGCG CCAAGCCGGT CGCTGGCCTG ACCGCGCCGG ACTTCGTGCG CATGGCCAAG
AAGATCGAGG CGCGTGGCGT CGGCGAGCTG GCGCGCCGGA TCATGGAAAC CAGCGGCCAG
GTCATGCGCT GGGCCGTGGC GCACGGCCTG ACCGAGCGCA ACCCGACCGC CGACGTGAAG
CCCGGCGACA TCCTCAAGCC GCGCACGGTC GAGAACTTCG CCCGTGTCGG CGCGGCCGAA
CTGCCCGACC TGATGCGCCA CATCAACGCG TACGACGGCA GCGTGTTCAC GCGCCTGGCG
CTGCAGCTGA TGGCGCTGAC CTTCGTGCGC ACGTCAGAGC TGATCGGCGC GCAGTGGCAA
GAGTTCGACC TCGATGCCGC GGAATGGACG ATCCCGCCCG ATCGCATCGG CCGCAAGGGC
CGGCAGGGCG AGCGCCGTGC GCACCTGGTT CCGCTGGCGC CGCAGGCCCT GGCGGTGCTG
CGCCTGCTGC AGTCGGCGCG CGGTGCTGAC CGTTGCCGCG GGCCGGCGCT GCTGTTCCCC
GGCGAGCGCG ACCACGAGCG CCCGATGTCC AACAACACCA TGCTGAAGGC GCTGGAGCGC
ATGGGCTACA AGGGCAAGAT GACCGGCCAC GGCTTCCGGG GCATCGCCTC GACGGCGCTG
AACGAGATGG GATTCCGCTT CGACGTGATC GAGGCCCAGC TGTCGCACAT CGAGGGCAAC
CGGGTCCGCG CCGCCTACAA CCACGCCGTC TGTGCTGGTC AAGTTTTTTC GGACACCACG
ATAGGTTGTT TGATTGCCGA TTGCTGCTCG AAGGCATTGG GTGGCAGGTT GCCCAGTTTG
GAGTGCAGCC GCACGCTGTT GTAG
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| Protein sequence | MLTDTECRNA KCPEGRAFVR LADAGGLYLE VKPPGAKTPS GSKLWRWKYR HGGKEKLLAI
GAYPAVSVAG ARREQAKARA LLDAGTDPGE ARKEAKYAKL NEHETSFEAV ARQWWAGWKA
NKTERYAEYV LRRLELDAFP VIGAKPVAGL TAPDFVRMAK KIEARGVGEL ARRIMETSGQ
VMRWAVAHGL TERNPTADVK PGDILKPRTV ENFARVGAAE LPDLMRHINA YDGSVFTRLA
LQLMALTFVR TSELIGAQWQ EFDLDAAEWT IPPDRIGRKG RQGERRAHLV PLAPQALAVL
RLLQSARGAD RCRGPALLFP GERDHERPMS NNTMLKALER MGYKGKMTGH GFRGIASTAL
NEMGFRFDVI EAQLSHIEGN RVRAAYNHAV CAGQVFSDTT IGCLIADCCS KALGGRLPSL
ECSRTLL
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