| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2380 |
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| Symbol | |
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| ID | 6159934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2586470 |
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| End bp | 2587756 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665149 |
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| Product | D-amino-acid dehydrogenase |
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| Protein accession | YP_001791410 |
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| Protein GI | 171059061 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCC TCGTCCTCGG CGCCGGCCTG CTCGGCGTTA CCTCGGCCTA TTTCCTGCGC
CAGCAAGGTC ACGACGTCAC CGTCGTCGAC CGCCAGGCCA CGCCCGCATC CGAGACCAGC
TTCGCCAACG GCGGCCAGAT CTCGGTCAGC CACGCCGAAC CCTGGGCCAA CCCGAGCGCA
CCGCTGAAGG TGCTGCAATG GCTGGGCAAG GAAGACGCGC CGCTGCTGTT TCGCCTGCGC
GCCGACGCCC GCCAGTGGCG CTGGGTGCTG CAGTTCCTGC GCGAATGTAC GCCCGGGCGC
ACGCGCCACA ACATCGAGCA GATCGTCAAG CTCGGCACCT ACAGCCGCGA CACGCTGCAG
CAGCTGCGGC GTGACATCGG CGTGGCCTAC GACGAGCGCA CGCAGGGCAT CCTGCACTTC
TACACCAGCC AGAAAGAGTT CGACGGCGCC GAGGCCCCGG CCGCGCAGAT GCGCGAACTG
GGCTGTGACC GGCGCGTGAT CTCGGCCGAC GAAGCCGTGC GCATCGAGCC CGCGCTGGCG
GCGATCCGCG CGCAACTGGC CGGCGCCACC TACACGGCGG AAGACGAATC CGGCGATGCC
AACCGCTTCG CCCGCGAACT GGTCAAACAC TGCCAGGCCG ACGGCGTGCA GTTCCTGATG
AGCCACACCG TGACTGCGCT GCGCGAGGTG GGCGGGCAGA TCGACCACGT CGAGGCGACC
GACGCCGAAG GCCGTTTCCA GCGCCTGCGC GCCGACGCCT ACGTGCTGGC GATGGGCAGC
CTGTCGCCGC TCTACGCGCG TCCGCTGGGC ATCGAGCTGC CGATCTACCC GGCCAAGGGC
TACTCGGTGA CGATGCCGGT CAAGGACGCC GCCAAGGCGC ACCAGGTCTC GCTGACCGAC
GACGAATACA AGCTGGTGTT CTCGCGCCTG ACCACGCCCG GCGTGGACGG CCAGCCCGGC
ACCGACCGCC TGCGCATCGC CGGCACGGCC GAGTTGAACG GCTATGACCG CGACCTGAAC
CGGGTGCGCT GCGAGGCCAT CGTGCGCCGC ACCGAGGAGC TGTTCCCCGG CGCCGGTGAC
ACCGCGCAGG CGCAGTTCTG GACCGGCCTG CGCCCGGCCA CGCCGAGCAA CGTGCCGATC
ATCGGCCGCA GCAAGCTGCG CAACCTGTTC CTCAACACGG GCCACGGCAC GCTGGGCTGG
ACGCACTCGT GCGGCTCGGG CAAGAGCATC GCCCGCATCG TCAGCGGGCT GGCGCCGGAG
ATCGATTTCG CGTTTGCCGG CGCCTGA
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| Protein sequence | MKVLVLGAGL LGVTSAYFLR QQGHDVTVVD RQATPASETS FANGGQISVS HAEPWANPSA
PLKVLQWLGK EDAPLLFRLR ADARQWRWVL QFLRECTPGR TRHNIEQIVK LGTYSRDTLQ
QLRRDIGVAY DERTQGILHF YTSQKEFDGA EAPAAQMREL GCDRRVISAD EAVRIEPALA
AIRAQLAGAT YTAEDESGDA NRFARELVKH CQADGVQFLM SHTVTALREV GGQIDHVEAT
DAEGRFQRLR ADAYVLAMGS LSPLYARPLG IELPIYPAKG YSVTMPVKDA AKAHQVSLTD
DEYKLVFSRL TTPGVDGQPG TDRLRIAGTA ELNGYDRDLN RVRCEAIVRR TEELFPGAGD
TAQAQFWTGL RPATPSNVPI IGRSKLRNLF LNTGHGTLGW THSCGSGKSI ARIVSGLAPE
IDFAFAGA
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