| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2371 |
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| Symbol | |
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| ID | 6160041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2575862 |
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| End bp | 2577460 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641665140 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_001791401 |
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| Protein GI | 171059052 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCG CGCAGGCCTG CAATCTGGCG CAACTGCTGC GCCAGACCGC GCGCCAGTTC
CCGGATCGGC CCGGCCTGAT CCAGGGCGAC AACCGCTGGA GCTGGTCGCA GATCGACCGC
CGCGTCGACG CCCTGGTGGC GGCGCTGCAC GCGCTCGGGC TGCAGAAGGG CGACTGCATC
CTCACCCAGT CGCGCAACAA CCTGGCGATG TTCGAATGCG CCTGGGCGGC GTTTCGCATG
GGCTGCGTGT GGGTGCCGAC CAACTTCCGG CTCACGCCGC AGGAGGTGGC GTATCTCGGC
GAATCGAGCG GCGCGCGCGC CATGCTGGTC GAGACCTGTT TTGCGGGCCA TGCCGAGGCG
GTGCAGGCCG CCGCACCCGA GTTGAAGCAC GTGGTGTGGA TCGGCGCGGA TGCACCCGCC
GGCTCGCTGG ATTACGAGGC GCTGCTCGCT CGACACGCCG ATGCGCCTGC GGCCGAGGCC
ACGGTGGCGC ACGACGATCC GCTCTGGTTC TTCTACACCT CGGGCACCAC CGGCAAGCCC
AAGGCGGCGA TCCTGACACA CGGCCAGATG GGCTTCGTGG TCACCAACCA CCTGGCCGAC
CTGATCCCCG GCACGACCGA GACCGACTGC TCGATCGCGG TGGCGCCGCT GTCGCACGGC
GCGGGCATCC ACGCGCTGCT CAACGTCGCC CGCGGTGCGG CCACCGTGCT GCTGCCGGGC
GAGAAGATGG ACCCGGCCGT GGTCTGGCAG CTGATCGCGC AGCACCGCGT CAGCAACCTG
TTCACGGTGC CGACGATCGT CAAGCTGCTG GTCGAGCACC CGGCCGTCGA TCAATGCGAT
CACAGCAGCC TGCGCCACGT GATCTATGCC GGCGCGCCGA TGTACCGCGC CGACCAGCGC
CTGGCGCTGC AAAAGCTCGG CCCGGTGCTG GTGCAGTACT TCGGCCTGGG CGAGGTGACC
GGCTGCATCA CGGTGCTTCC CGCCCACATG CACAGCGCCG ACGATGCCGA TCCGAATGCC
CACATCGGCA GCTGCGGGCG GCCGCGCACC GGCATGGAAG TGGCCGTGCT CGACGCCGAG
ATGCAGCCCG TCGCCACCGG CGAGATCGGC GAGATCTGCG TGCGTGGCCC GGCCGTGTTC
GCCGGCTATC ACGCCAATCC GGAAGCCACG GCCAAGGCGC TGCGCGGTGG CTGGTTCCAC
ACCGGCGACC TCGGCCGGCT CGACGCGCGC GGCCTGCTCT ACATCACCGG CCGCGAGTCG
GACATGTACA TCTCCGGCGG CTCCAACGTC TACCCGCGCG AATGCGAGGA GCTGCTGCTC
ACCCACCCCG GCGTGGCCGA GGTGGCGGTG CTGGGCGTGC CCGACCGCAC CTGGGGCGAG
GTCGGCGTGG CCGTGGTGGT GCGCCGCGAG GGCGTGCCGG CGGTGAATGC CGAGACGCTG
CTGGCCCACC TCGACGGCCA TCTGGCGCGC TACCGCTGGC CGCGCCAGTT CGTCTTCTGG
GACGCGCTGC CCAAGTCCGG TTACGGCAAG ATCACCAAGA AGGACGTGCG CGCCCTGCTC
TACGAGCGCG GTGACGTCAT GCCGATCGAC GCCGGCTGA
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| Protein sequence | MNAAQACNLA QLLRQTARQF PDRPGLIQGD NRWSWSQIDR RVDALVAALH ALGLQKGDCI
LTQSRNNLAM FECAWAAFRM GCVWVPTNFR LTPQEVAYLG ESSGARAMLV ETCFAGHAEA
VQAAAPELKH VVWIGADAPA GSLDYEALLA RHADAPAAEA TVAHDDPLWF FYTSGTTGKP
KAAILTHGQM GFVVTNHLAD LIPGTTETDC SIAVAPLSHG AGIHALLNVA RGAATVLLPG
EKMDPAVVWQ LIAQHRVSNL FTVPTIVKLL VEHPAVDQCD HSSLRHVIYA GAPMYRADQR
LALQKLGPVL VQYFGLGEVT GCITVLPAHM HSADDADPNA HIGSCGRPRT GMEVAVLDAE
MQPVATGEIG EICVRGPAVF AGYHANPEAT AKALRGGWFH TGDLGRLDAR GLLYITGRES
DMYISGGSNV YPRECEELLL THPGVAEVAV LGVPDRTWGE VGVAVVVRRE GVPAVNAETL
LAHLDGHLAR YRWPRQFVFW DALPKSGYGK ITKKDVRALL YERGDVMPID AG
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