Gene Lcho_2370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2370 
Symbol 
ID6160040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2574687 
End bp2575865 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content71% 
IMG OID641665139 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001791400 
Protein GI171059051 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA CACCCCACAT CGTCGGCTGG GCCCACACGC CCTTCGGCAA GCTCGATGCG 
CTCGACACCG AGCAGCTGTT CCGCGAGGTG GCACTGCCCG CGATCGAGAG CGCCGGCCTC
GCGCCGCGCG ACATCGACGG CGTCTTCGTC GGCCATTTCA ACGGCGGTTT CGTGCGCCAG
GATTTCAGTG GCGCGCTCGC CGCGCTGGCC GTGCCCGAGC TGCGCCACAC GCCTTCGGTG
CGGCTCGAAA ACGCCTGCGC CACCGGCTCG GCCGCGATCT GGGCGGGGCT CGACGCGCTG
GCGTCGGGGC GCATGCAGCG CGTGCTGGTG GTCGGGCTGG AGAAGATGAA CACCCTGCCC
AACGAGCAGA TCGGCGAGAT CCTGCTGCGC TGCTCGTATG TCAAGGACGA GGGCGACACA
CCCGGCGGTT TTGCCGGCGT GTTCGGCAAG ATCGCCAGCA GCTACTTCGA GCGTTTTGGC
GACCAGAGCG ACGCGCTGGC CGCGATCTCG GCCAAGAACC ACGCCAACGG CGTGCACAAC
CCCCACGCGC ACATGCGGCG CGACCTGGGG TTCGAATTCT GCCGCACGCC GTCGGCCAAG
AACCCGTTCG TGGCCGGCCC GCTCAAGCGT TCGGACTGCT CGCTGGTGTC CGACGGCGCC
GCCGCGCTGG TGATCGCCAA CGAAGCGCTG CCCGGCGCCG CGCAGCCGGC CGTGCGCTGG
CGCTCGCGCA CGCAGGTCAA CGACTACCTG CCGCTGTCCT ACCGCGACCC GACCCGTTTC
GAGGGCGCGG CGATGGCCTG GTCACGCGGC CTGGCCGACG CCGGCTGCAC GCTGGCCGAC
CTGCAGTTCG TCGAGACCCA CGACTGTTTC ACCGTCGCCG AACTGCTGGA GTACGAGGCG
ATGGGCCTGG CGCCGCACGG CCAGGGCGCG CGCGTGATCC TCGACGGCGT GAGCCGCATC
GACGGCCGGC TGCCGGTCAA CCCGTCGGGC GGACTGAAGT CGCGCGGCCA CCCGATCGGC
GCCACCGGCG TGTCGCAGCA CGTGATGGCG GCGATGCAGC TGAGCGGCAG CGCCGGCGCG
ATGCAGATCG GCTCGGCACA GCGCGGCGCG GTCTTCAACA TGGGCGGCGC GGCGGTGGCC
AACTACCTGA GCATCCTCGA AGCGAGCGGC GCGGCATGA
 
Protein sequence
MTATPHIVGW AHTPFGKLDA LDTEQLFREV ALPAIESAGL APRDIDGVFV GHFNGGFVRQ 
DFSGALAALA VPELRHTPSV RLENACATGS AAIWAGLDAL ASGRMQRVLV VGLEKMNTLP
NEQIGEILLR CSYVKDEGDT PGGFAGVFGK IASSYFERFG DQSDALAAIS AKNHANGVHN
PHAHMRRDLG FEFCRTPSAK NPFVAGPLKR SDCSLVSDGA AALVIANEAL PGAAQPAVRW
RSRTQVNDYL PLSYRDPTRF EGAAMAWSRG LADAGCTLAD LQFVETHDCF TVAELLEYEA
MGLAPHGQGA RVILDGVSRI DGRLPVNPSG GLKSRGHPIG ATGVSQHVMA AMQLSGSAGA
MQIGSAQRGA VFNMGGAAVA NYLSILEASG AA