| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2367 |
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| Symbol | |
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| ID | 6159755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2571578 |
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| End bp | 2572366 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641665136 |
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| Product | polysaccharide export protein EpsE |
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| Protein accession | YP_001791397 |
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| Protein GI | 171059048 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | [TIGR03028] polysaccharide export protein EpsE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 86 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGGCC TGATCGGCAT GCTGCCGCTC GCGGCACAAG CCCAGGACAA GGCCGATCCG
AAAAAGGACT ACGTCATCGG TGCGGGTGAC GTGCTTCGCA TCACCGTCTA CCAGAACCAG
GATCTCTCGC TCGAGACCCG CGTTGCCGAA AGCGGCGCGG TCAGCTACCC GCTGCTCGGC
TCGGTGGTGC TGGGCGGCCT GAGCGTGACG CAGGCCGAAT CGGCCATCGC CGACGGCCTG
CGCCGCGGCA ACTTCGTCAA GCAGCCGCAG GTCAGCGTGC TGCTGATGCA GGTGCGTGGC
AACCAGGCCG CCGTGCTGGG CATGGTCAAC CGGCCCGGCC GCTATCCGAT CGAAGTGACC
GGCATGCGCC TGAGCGAACT GCTCGCCACC GCCGGCGGCA TCGCGGTGGG CGGCAGCGAT
GTCGTCATCC ACACCGGCGT GCGCGGCGGC CAGCTGGTGC GCACCCGGGT CGACATCGGC
CGTCTGCTCA CCGGCGCCGG CAACGAACAG GATCCGGTGG TGCAGAACGG CGACGCGCTC
TACGTCGAGC GCATGCCGAT GGTCTACATC TACGGCGAGG TGCAGCGCCC CGGCTCGATG
CGCCTGGAGC GCGGCATGAC CGTCATGCAG GCACTCGCCG GTGGTGGTGG CACCAACACG
CGCGGCACCG TCAAGGGCCT CAAGGTGCAC CGCCGCGGCG CCGACGGCGT CATCAAGGAA
TTCGAGCCGG CGCTCACCGA TACCCTCATC GACGGCGACG TGATCTACGT GCGCGAAAGC
CTGTTCTGA
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| Protein sequence | MFGLIGMLPL AAQAQDKADP KKDYVIGAGD VLRITVYQNQ DLSLETRVAE SGAVSYPLLG
SVVLGGLSVT QAESAIADGL RRGNFVKQPQ VSVLLMQVRG NQAAVLGMVN RPGRYPIEVT
GMRLSELLAT AGGIAVGGSD VVIHTGVRGG QLVRTRVDIG RLLTGAGNEQ DPVVQNGDAL
YVERMPMVYI YGEVQRPGSM RLERGMTVMQ ALAGGGGTNT RGTVKGLKVH RRGADGVIKE
FEPALTDTLI DGDVIYVRES LF
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