| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2349 |
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| Symbol | |
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| ID | 6159795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2552990 |
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| End bp | 2554114 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641665118 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001791379 |
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| Protein GI | 171059030 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 126 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA AACAAAAAGT CGCCCTCATC ACCGGCGTTA CGGGCCAAGA CGGCGCCTAC
CTCGCCGAGT TCCTGCTCAA GAAGGGCTAC AAAGTCCACG GCATCAAGCG CCGCAGCAGC
CTGTTCAACA CCGACCGCAT CGACCACCTG TACCAGGATC CGCACGTCGA GCAGCGCAAC
TTCACCCTGC ACTACGGTGA CCTGACCGAC TCGACCAGCC TGGTGCGCAT CGTCCAGCTG
GTGCAGCCCG ACGAGATCTA CAACCTGGCC GCACAGAGCC ACGTCGCCGT CTCGTTCGAG
GAGCCCGAAT ACACCGCCAA CGCCGACGGC ATCGGCGCGC TGCGGCTGCT CGAAGCCATC
CGCATCTGCG GCCTGGAAAA GAAGACCCGT TTCTACCAGG CGTCCACCAG CGAGCTCTAC
GGTCTGGTGC AGGAAACCCC GCAGAAGGAA ACCACGCCCT TCTACCCGCG CAGCCCCTAC
GCGGTGGCCA AGATGTACGC CTACTGGATC ACGGTCAACT ACCGCGAGGC CTACGGCATC
TACGCCTGCA ACGGCGTGCT GTTCAACCAC GAGAGCCCGA TCCGCGGCGA GACCTTCGTC
ACTCGCAAGA TCACGCGTGC CGTCGCCCGC ATCGCGCTGG GCCTGCAGGA CTGCCTGTAC
CTGGGCAACA TGAGCGCGCT GCGCGACTGG GGCCACGCGC GCGATTACGT CGAGATGCAG
TGGCTGATGC TGCAGCAGAG CCAGGCCGAA GACTTCGTCA TCGCCACCGG CGTGCAGTAC
AGCGTGCGCC AGTTCGTCGA GAAGGCGGCT GCCGAGTTGG GCATCACGAT TGCGTTTGAG
GGTAAAGGCG AAAACGAATA CGGCTACGTG GCGTCGGTCA CTGGCAAACA GGCTACATGC
AAGGTGGGTG ACGTGGTGGT CAAGGTCGAC CCGCGCTACT ACCGCCCGAC CGAAGTCGAA
ACCCTGCTCG GCGACCCGAC CAAGGCCAAG GTCAAGCTGG GCTGGACGCC GCGTACCACC
TTCGACGAAT TGGTCAAGGA AATGATCGAG GCCGACTACA CCTCAGCGCG CAAGGACAGC
CTGGTCAAGA TGGCGGGTTT CCAGGCCTTC GATCACCACG AGTGA
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| Protein sequence | MTEKQKVALI TGVTGQDGAY LAEFLLKKGY KVHGIKRRSS LFNTDRIDHL YQDPHVEQRN
FTLHYGDLTD STSLVRIVQL VQPDEIYNLA AQSHVAVSFE EPEYTANADG IGALRLLEAI
RICGLEKKTR FYQASTSELY GLVQETPQKE TTPFYPRSPY AVAKMYAYWI TVNYREAYGI
YACNGVLFNH ESPIRGETFV TRKITRAVAR IALGLQDCLY LGNMSALRDW GHARDYVEMQ
WLMLQQSQAE DFVIATGVQY SVRQFVEKAA AELGITIAFE GKGENEYGYV ASVTGKQATC
KVGDVVVKVD PRYYRPTEVE TLLGDPTKAK VKLGWTPRTT FDELVKEMIE ADYTSARKDS
LVKMAGFQAF DHHE
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