| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2347 |
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| Symbol | |
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| ID | 6159724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2549931 |
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| End bp | 2551430 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641665116 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001791377 |
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| Protein GI | 171059028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 128 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAG CTGTCTCGAG TAATGGATTA TTGGGCAAGG CAAAGACGGC CGCCATCTGG
GGGTATATTG GCACCCTGGG TAGAGTTGCA ATTCAATTGA TTGCACAGAT AGTGTTGGCA
AGAATTATTG GCCCGGCTGA ATATGGGGTA TTTGCTGTCG GTGCAATTAT TGTTGGGATT
GCGAATTACA TAGCGGACGG CGGAATAGGT GCGTCGCTCA TCCAAAAGAG TAGGCTGGAT
GACGAAATAA CTATTTTTGT GTCGACGTGG CAAAACATAA CTGGAGCGGT AACTTTCTTT
TTCATTTGGA TTTTTGCGCC TTATTTTTCT GCGTTTTTTA ATGCAGGAGA TAGTGCGCCA
AGTGTAATTC GCCTTATGGG GATTGTATGT TGGTTGTCGT CGATTGGCTC TGTTTCAATG
AACTTGTTGC GTAGAAACTT GGATTATCGT GGAATCCAAA TATCCCAGTT GAGTGGTATA
TTTTTTGGCT ATGCCTTTGT TGGTATCCCA TTGGCGCATT TTGGTGCTGG CGTATGGAGT
TTGGCGTTCG CATGGGTAGC GCAAGTCGTT CTCACAACAA TAATTCTGTT TGTGCGAGCG
CGGCCTCCTA TAGGCATAAG ATTTAGACAT CCGGAAGAAA AGGAATTGAC GAAATTTGGC
TTGTCAGCAC TCGTTAGTAA CATATCGACG TGGCTGGGAA CAAGTATTGA TAAGACAATT
GTTGGGTATG GCTACCTGCC GTCTCAGCTT GCCAATTACA CTGTTGCCAG TAATCTGATA
TTTACAGCAA CATCACAGAT TTTATCTACT GCGCAACAAG TTATTTTTGC AACTGCATCG
CGCGACTCAA GTCAGAATAG GGAGAACATA AAAAAGGCGC TGCACCTTTT GCTTGAAGTG
GGTGGATTGA TATTCTTGCC ACTTATGTTT GTGATATCTA CGTCCTCAGA CACAATTATT
AGCGCCCTTT ACGGTTCTGA GTGGATGGAT GCTGCCCTTG TATTGAGTCC TGCTGCGCTA
ACTATGGCTT TCTATGGGCT ATCTGGACTG CTTACGCCGC TTTTGTGGTC AATCGGCAAA
GTGTCAAGCG ATGCGAAAGC TCAATTCGTT GGCGCTGTCA TGATAGGTAT AGCTGCGTAC
GCTTCCATAA CAGCATCGAA TCCCGCTGCA ATCGCATGGG CGGTGCTTCC TTGTGTGTTA
ATTCGAGCTA TTTGGACGGT TAGGCAGATT AGTAGGGCAG TAGGTGCAAC TAGAGCTGAA
ATGGCGCGGT CTTTAATAGG TGGTGTTGTA GCTGCAATAG CAATTGGTGT GCTAGTCAAT
GGCGTTATGT ACATAGCATT TTCTAGTCAA CTGAGCCCAG CATTGCAAAT GCTAACTCTG
GTTTTTACAT GTTTTTTGTG TTTTCCAGTT GTTATCGGCG TCGTCATTTA TACTACTGGA
ACTCGTGAAT TAAATGACTT GATTCGTCCT CGGTTGCTAC CGTACTTTGC AGGTCGCTAA
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| Protein sequence | MNKAVSSNGL LGKAKTAAIW GYIGTLGRVA IQLIAQIVLA RIIGPAEYGV FAVGAIIVGI
ANYIADGGIG ASLIQKSRLD DEITIFVSTW QNITGAVTFF FIWIFAPYFS AFFNAGDSAP
SVIRLMGIVC WLSSIGSVSM NLLRRNLDYR GIQISQLSGI FFGYAFVGIP LAHFGAGVWS
LAFAWVAQVV LTTIILFVRA RPPIGIRFRH PEEKELTKFG LSALVSNIST WLGTSIDKTI
VGYGYLPSQL ANYTVASNLI FTATSQILST AQQVIFATAS RDSSQNRENI KKALHLLLEV
GGLIFLPLMF VISTSSDTII SALYGSEWMD AALVLSPAAL TMAFYGLSGL LTPLLWSIGK
VSSDAKAQFV GAVMIGIAAY ASITASNPAA IAWAVLPCVL IRAIWTVRQI SRAVGATRAE
MARSLIGGVV AAIAIGVLVN GVMYIAFSSQ LSPALQMLTL VFTCFLCFPV VIGVVIYTTG
TRELNDLIRP RLLPYFAGR
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