| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2340 |
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| Symbol | |
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| ID | 6160122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2540058 |
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| End bp | 2542754 |
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| Gene Length | 2697 bp |
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| Protein Length | 898 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641665109 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791370 |
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| Protein GI | 171059021 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 116 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGTT TTTTCATGTT GAGCAGTCCG GCCGTGGGCT GTTCACTGAT GCTCGCCGCG
TTGGCTGGCG GGTTGAGCGG TTGCGGCGGC GGTAGCGATG AAGATGTCGC TTCGCCAGTT
GCTGGCAGCC AGGCGATTGA TGGGACGTCG CGCATTCAGG CCGCGGCGGC CGGTGATTAC
TATGTAGACG CATCGGCAGG TAGCGACACC AACTCGGGTA GTCAGGCAGC ACCTTGGAAG
ACGCTTGCGC GTATCTCCAA GGCCGGCTTG AGCACAGGGC AAGCAGTGTT TCTGCGGTGC
GGTGCTGTGT GGCGCGAATC GCTGAGCCTC GGTGCCACGC AGTTCGCTGA CAGTATCAGT
TTCGGATCGT ATGGGGCCGA ATGCGTGACG AGCAAACCGC GCATTCTGGG CTCGGACAAC
TTTTCTGGCG GGTGGGCGAA ATCAGGCAAC ATATGGTCGC GCAAGGTGCC TGCAGGCACG
CCCAAGATCG GGCGCTTGTT CATCAATGGC GCCGCGCAGC GTTTGGCGCA ATGGCCTAAC
CATTCTGCTG CTGGCGGCTT TGCGGTGGCC GATGCGAGTA CTGCAGCTTC CAATACCCAG
TTCAAGATCA AGGCTGCTGA CGCTGCACTC TTGGCTGGCA AGGATATCGT GGGGGCCATT
GCTTTGTTGC GCAGCGTTGC GTGGTCGGTC GATTCGAGCA ACATCAGCAG TTTCAGCAGT
AGCACCAATG TTGTCGGTCT GGGAACGGCC ACGGTATACG CCACAGGTTC GACCACCGAA
TACGTGTTGG CCGACAAAAA ATGGATGGTT GATGCACCAG GTGAGTTTTT TCACGACACG
GCCACCAACA CGGTGTATGT CTATCCGGCT GATGCCACGT CTCAGGCTAG CCTGAATACC
ACCCAAGTGG AAGGTTCGGT ACGAGATGTG GCTGTGGCGC TGTCCGGCCG CAAGGGTTTG
AGGATCAGCG GCATTGCAAT CGAGATGGCT CGCTTGGATG GACTGGCGCT AAGCGATACG
CCTGAGTCCA GCGTGAGTGG CGTTGAGGTG CGAGGCCATG GGCGCAATGG TGTGCAAGTG
GCGCTTCGTG CGGCACCCGT CGGCACTGCA CGCGGGCTTG ATCTGCGCAA TAGCCTGATT
TCGGACAATG GAGCAAACGG AATCAATGCC ACCAGTGCAA TGCGGGTTGA TGTGATCGGC
AATACAGTGC TCGAAACGGG TACTCAGGCT ATGGCGGGCA ACTCGCTCGG TGCCATCCTG
GTGGGGCCGG AATCATCGGT GGAAAATAAT TTCATCCAGA ATTCGGCGTA CTTGGGGATT
CGGTTTTCCG GTACGGGCGG GTCTCGTGTC GCGGGCAACC GGATTGCGGG ACACTGCGCA
CGTTTGACTG ATTGCGCAGG AATTTATACC TGGAACGGCC CGAAAGCCAG TCGTGTCACC
AGCAACCAAA GTGCGCTAGT CACAGGTAAT CTGATTCAAG ACACCGTAGC GCGGCGTAGC
AGTGCGATTT CCGGTGGGTC GCTTGTTGCT GGCATTTATC TGGATGATTT TTCACTCGGA
ACTACCGTGC GTGATAACAC GGTTTCGGGT GGCCAGTATG GCGTCTATGT CCACAATGGT
TCTAATCATG TCATCGAAAG CAACAAGCTT TGGTTGAATA CGGCGTCGGC GATTTGGTCC
AATATGGACC AGACCGATGC CGACTACATG ACGGGCAATG CAGTCATTGG CAACGAGATC
GTGCGTTTGT CCAATGCCAC AGGAAGTTAC CCGGCATTGC CTATGGTCAA CTCGCCGCAA
GCTTTTATCT TTCGCAACCT GTATTCAGGT ACCGCCACTT TGACGAATGG CTCGAATTCA
TTCGCGCTGA ATCGTGTCTT GATGTTGAAC GCTGACGGCG CGCGTTTTGC ACGCGTGACG
ACGGCCAAGT CAGATGCTTA TCTTGATCCT GCCGCTTGGC GCAACTTGAA TGCAGGAGAA
ACGATTGTGC CGGCAAAGCC GCGCTACGTG ACACATCGGC CTGTTATGGG CGCGGAGTTG
ATCACCAATG GGGGTTTTGC GAATGCCCTG AACAGTTGGA ATGCATGGTT TGTGCCGCCC
GGTACAGGGC GTGTTTTTGC AGCGAGTGCT TCCACGCCTG GCTGCACGGG AACCTGCCTG
TTGTTCACCA ATACGAACAT GGCTGACTAT GTCAGCAGTT CGGCTGCTAC GTTGACCGCG
GGTAAGATGT ATCAGGTATC GTTCGACGCG ATGTACCTTG CCAATGGCAA TATTGCACCG
CCGTTCGTCG GTAGTGCGAC CCAGCCATTC GTTTCTTACG TCAAGATGCC CGGTATGGTG
TCGTCGAGTT CGATGGTGGG TCAAAAGGGT GAGGTTGGCA GGTTCACCGG GAACTTCGTG
GCGTCAACAT CGGCACAAGC TGTGACCATG CTCCGTGCGT CGCCTGCCAA GATGTCGGTC
GCTTTCGACA ATGTCTCGCT GCGTGAGATC TTGTCCTACA AGCTGGCGCC GGCCAGTGAG
TTTGTCGCGG TGGCCGCCGC TGGCACGGTG GATCGCAGCT TTGATTGCAG TGCGCTGGGT
TGGCCGGCCG GTTGTGCGGT GACGGACACA ATGGATAACG CTGTGGCGTT GCCTGTCGTG
GTGCCAGCGC GAACGGCCAA GCTCTTGTTG CGCGCCGGTT CGGCCTGGAG CAACTGA
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| Protein sequence | MARFFMLSSP AVGCSLMLAA LAGGLSGCGG GSDEDVASPV AGSQAIDGTS RIQAAAAGDY
YVDASAGSDT NSGSQAAPWK TLARISKAGL STGQAVFLRC GAVWRESLSL GATQFADSIS
FGSYGAECVT SKPRILGSDN FSGGWAKSGN IWSRKVPAGT PKIGRLFING AAQRLAQWPN
HSAAGGFAVA DASTAASNTQ FKIKAADAAL LAGKDIVGAI ALLRSVAWSV DSSNISSFSS
STNVVGLGTA TVYATGSTTE YVLADKKWMV DAPGEFFHDT ATNTVYVYPA DATSQASLNT
TQVEGSVRDV AVALSGRKGL RISGIAIEMA RLDGLALSDT PESSVSGVEV RGHGRNGVQV
ALRAAPVGTA RGLDLRNSLI SDNGANGINA TSAMRVDVIG NTVLETGTQA MAGNSLGAIL
VGPESSVENN FIQNSAYLGI RFSGTGGSRV AGNRIAGHCA RLTDCAGIYT WNGPKASRVT
SNQSALVTGN LIQDTVARRS SAISGGSLVA GIYLDDFSLG TTVRDNTVSG GQYGVYVHNG
SNHVIESNKL WLNTASAIWS NMDQTDADYM TGNAVIGNEI VRLSNATGSY PALPMVNSPQ
AFIFRNLYSG TATLTNGSNS FALNRVLMLN ADGARFARVT TAKSDAYLDP AAWRNLNAGE
TIVPAKPRYV THRPVMGAEL ITNGGFANAL NSWNAWFVPP GTGRVFAASA STPGCTGTCL
LFTNTNMADY VSSSAATLTA GKMYQVSFDA MYLANGNIAP PFVGSATQPF VSYVKMPGMV
SSSSMVGQKG EVGRFTGNFV ASTSAQAVTM LRASPAKMSV AFDNVSLREI LSYKLAPASE
FVAVAAAGTV DRSFDCSALG WPAGCAVTDT MDNAVALPVV VPARTAKLLL RAGSAWSN
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