Gene Lcho_2327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2327 
Symbol 
ID6161107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand+ 
Start bp2526785 
End bp2527405 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content68% 
IMG OID641665096 
Producthypothetical protein 
Protein accessionYP_001791357 
Protein GI171059008 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones122 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCCA TCGCCACCAC AGCCTTGTCG GCAGCAGGCG CGGCGCAGGC CCAGACCACC 
CTCACCGAAG ACTTCAACCA CGGCGTCAGC CTGGTCGGTG GCGCCTACCG CGGCAACAAC 
ACCGTGTCGG GATGGCTCAG CACGGGCACG GCCGACGCCG TGAGCGTCGG TGGCGCCAAC 
AGCGCCAATG CCGACAACTT CATCAGCCTG GCCAACGGTG GCGCCCTCAC CTACGGGTTC 
GCGCTGTCCG GCACGTCGGA TCTGGACCTG TCGTTCTGGT ACACGCGCTC ATCGAGCGAC 
AACAGCTTCA TCGCCAGCGT GACACTGACC GGCCAGACAC CGATCGTGCT GCTGCGCGAC 
GGCACCCACA GCGGCAACCC CGGCGCCGAT CAGAACAAGA CCGCGCAATA CGGCACCACG 
TTCAGCGGGC TTGCCGCGGG CGACTACAGC CTGACCTTCA ACTACACGGG CACCGCGCGC 
GGCAACTCGG TCTTCCAGTT CGACGATGTC GCCATGACGA TCAGCGCCGT GCCGGAACCG 
CAGCCCTACG CCCTGCTGCT GGCCGGGCTG GGCGCCGTCG GATTCATGGC TCGCCGCCGC 
CGCCGCACCG ATCCGACCTG A
 
Protein sequence
MAAIATTALS AAGAAQAQTT LTEDFNHGVS LVGGAYRGNN TVSGWLSTGT ADAVSVGGAN 
SANADNFISL ANGGALTYGF ALSGTSDLDL SFWYTRSSSD NSFIASVTLT GQTPIVLLRD 
GTHSGNPGAD QNKTAQYGTT FSGLAAGDYS LTFNYTGTAR GNSVFQFDDV AMTISAVPEP 
QPYALLLAGL GAVGFMARRR RRTDPT