Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2316 |
Symbol | |
ID | 6161937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | + |
Start bp | 2515117 |
End bp | 2516373 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641665085 |
Product | hypothetical protein |
Protein accession | YP_001791346 |
Protein GI | 171058997 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAT CGGCGGCTCG AGGCGGGCTC GAGGGCACGG CGCCCTCCTC GCCCACGTTG CCCGCCACGG CCCGGCCGGG CGCCGCCGTC ACGCCCGGAC TGGCCGAGGC CCTGCTGCGG CGCCTGGAAT GGACCGTGAT CCGCCGCCTC GACGGCCTGC TGCAGGGCGA CTGCCGCACC CTGCTGCGCG GCACCGGGCT CGATCTGGCC GACCTGCGCG AGTACCAGCC GCACGACGAC GTGCGCCACA TCGACTGGAA CGTGACCGCG CGCGTGGGCG TGCCCCACGT GCGGCAGTTC CAGGAAGACC GCGACATGAC GGTGGTGTTC CTGCTCGACC TGAGCTCGTC CGTCAATTGG GGAACCGTCT GCCCCCCGCC CGCCGAATGC GGCGGTCGAC CCCCCATGGG GATCGAACCC GGCTTGGGGC GGCCCGGCAC CGGGTTCGAC GCGGCCGGCC CGACCGATGC GAACCGCGGG GTGCGCACCA AGCAGCAGGT CGCCACCGAA CTGATCGCCG TGCTGGCGCG GCTGTTCACG CGCAGCGGGC ATCGGGTGTC GGCCTTGATC TACCGCCAGG GCGGCAGCAG CACCGAAGAA CTGCCCGCGC GCGGCGGCCG CGGCCAGGTT CTGCAGTTGC TGACCCGCAT CACCCGGCCG CACCGACTGT CTCGAACTGA AACAGTCGCC CCGCCGTTGC CGGTTCGGGG CTGGCTGAGC GGCTGGTTTC GTGGTAACCG CCCAGCCATC AGCCGCACCG ACGAAGCCAC CCGGCTGGCC GATCTGCTGC AGGCTGCCGA GCACCGCCTG CGCCGCCGCT GCACCGTGCT GGTGGTGTCG GACTTCATCA GCCAGCCCGG CTGGCAGGCG CCGCTCGGCC GGCTGGCACT GCGCCATGAC GTGCTGGCGG TGCGACTCAG CGACCCGTCC GAACACGAGC TGCCGGCCGC CGGCCTGGTG CTGCTGCGCG ACGCCGAAAG CGGCGAAGAA CTGCTGGTCG ACACCGACGA TCCGGCCCTG CGCGCCCGCC ACGCCGCGCT GGCGCAAGCC CACGAGCGCC GCGTGTTGGA CGGCCTCGCC GGCGCCGGTG TCGACACGCT CGAGCTCGGC ACCGCCGAGC CGCTGCTCGA GGCCCTGCGG CGCTTCCTGG CACTGCGCCG CCTGCGCCGC AATCAGCGCG CGGGCGCCGC CCCGCACAGG GCAGGCAGCG CCGGCCCGAC CACCGCGCAG CCTGCGCGGC CGGAGACACC CCGATGA
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Protein sequence | MATSAARGGL EGTAPSSPTL PATARPGAAV TPGLAEALLR RLEWTVIRRL DGLLQGDCRT LLRGTGLDLA DLREYQPHDD VRHIDWNVTA RVGVPHVRQF QEDRDMTVVF LLDLSSSVNW GTVCPPPAEC GGRPPMGIEP GLGRPGTGFD AAGPTDANRG VRTKQQVATE LIAVLARLFT RSGHRVSALI YRQGGSSTEE LPARGGRGQV LQLLTRITRP HRLSRTETVA PPLPVRGWLS GWFRGNRPAI SRTDEATRLA DLLQAAEHRL RRRCTVLVVS DFISQPGWQA PLGRLALRHD VLAVRLSDPS EHELPAAGLV LLRDAESGEE LLVDTDDPAL RARHAALAQA HERRVLDGLA GAGVDTLELG TAEPLLEALR RFLALRRLRR NQRAGAAPHR AGSAGPTTAQ PARPETPR
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