| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2313 |
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| Symbol | |
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| ID | 6161934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2511994 |
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| End bp | 2512842 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641665082 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001791343 |
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| Protein GI | 171058994 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCG CCTGGATCGA CACCCACTGC CACCTCGACG CGAGCGAGTT CGACGCCGAC
CGCGCCGCCG TGCGCCGTCG GGCGCGCGAG GCCGGTGTCG GCCTGCTGGT GCTGCCGACG
GTGTGCAGCG GCAACCTCGC GGCGGTGCAG GCGCTGGCCC ACGCCGAGGG CGACGCCTAC
GCGCTGGGCC TGCACCCGCT CTACGTCGGC CACGAGCCGC CGGGCGCGCT GGCCGACCTG
CGCCGCGCGC TGCAGGCCGC GGCGGCCGAC CCGCGCCTGG TGGCGGTGGG CGAGATCGGC
CTCGACGGTT TCGTGCCCGG CCTCGACTGG GCCGTGCAGA CTGATTACTA CAGTGCCCAA
CTGCGCCTGG CCGCCGAGTT CGACCTGCCG GTGATCGTGC ACGTGCGGCG CTCGGCCGAC
GCGCTGCTCC AGCAGCTGCG TCGCATCCGC GTGCGCGGCG GCATCGCCCA TGCCTTCAAC
GGCAGCGAGC GGCAGGCGAT GGCCTTCGTC GAACTGGGTT TCAAGCTCGG CTTCGGCGGC
GCCATGACCT TCGACCGCGC CCTTCAGATC CGCCGCCTCG CCGCCACGCT GCCGGTGCAG
GCGCTGGTGC TGGAGACCGA TGCGCCCGAC ATCCCGCCGC ACTGGCTCTA CCGCAGCGCG
GCCGAACGCG CGGCCGGCGC GCGCTCGCGC AACGAGCCGG CCGAGCTGCC TCGCATCGCC
GCCGAGCTGG CGCAGTTGCG TGGCATCGGC CTGGACGAGC TGGCGCGCCA AACCGGCGCC
AACGCCTGTG CCGCGCTGCC GCGGCTGGCT GGGTTGCTGG CGGACGGCGC TGTGGCCGCC
GATTCATGA
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| Protein sequence | MNGAWIDTHC HLDASEFDAD RAAVRRRARE AGVGLLVLPT VCSGNLAAVQ ALAHAEGDAY
ALGLHPLYVG HEPPGALADL RRALQAAAAD PRLVAVGEIG LDGFVPGLDW AVQTDYYSAQ
LRLAAEFDLP VIVHVRRSAD ALLQQLRRIR VRGGIAHAFN GSERQAMAFV ELGFKLGFGG
AMTFDRALQI RRLAATLPVQ ALVLETDAPD IPPHWLYRSA AERAAGARSR NEPAELPRIA
AELAQLRGIG LDELARQTGA NACAALPRLA GLLADGAVAA DS
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