| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2298 |
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| Symbol | |
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| ID | 6160863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2488475 |
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| End bp | 2493427 |
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| Gene Length | 4953 bp |
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| Protein Length | 1650 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641665068 |
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| Product | heme peroxidase |
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| Protein accession | YP_001791329 |
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| Protein GI | 171058980 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCG TCAGACACGA CCTCGAATTC ATCCTGCAGC AGATCTTCAT CGCCGAGGCA
CACGCGGCCG GTGGCGACCT GCTGACCCTG GTGACCAGCC CGCTGCTGCC ATACGGCCTG
CGCACGGTGG ACGGCAGCCA CAACAACATC GTGCCCGGCC AGGAAGAGTT CGGCGCCGCC
GACCGGCCGA TGCCCAATGC GCTGCAGCAG TTCTTCAGAA CCGCAGAAAT GGGCGATGTC
GACGGCCCCG GACCGGGCGG ACTGGTGCAG ACCACCTACG CCAACGCCAC CGGCGGCCTG
GTGTTCGACT CGCAACCGCG CGTCATCAGC AACCTGATCT CCGACCAGAC CATCACCAAC
CAGGCCGCGG TCGATGTGGC CACCCGATTT GCGGACGGTG AACCGGTGGT GATCTCCGAT
GAGGGCACCT ACTTCATCCA GAACGTCGCC CCTGACGAAG GCCTGTCGGC GCCGTTCAAT
TCGTGGTTCA CGATCTTCGG CCAGTTCTTC GACCACGGCC TCGACCTGAT CGGAAAGGGT
GCCGGCACGG TCTTCATTCC GCTCAAGCCG GACGATCCGC TGATCGCCGG CGATGACGGC
ATCCTCGGCA ACGCCGACGA CCTGCCGCCG CAGCTGCAGT TCATGGCCCT GTCGCGCGCA
GCGGCGTCGA ACATCGCCCC TGGCGCCGAC GGCGTGGTCG GTACCTCCGA CGACGTGCGC
ACCTTCAGCA ACTCGACCAC CCCGTGGATC GACCAGAACC AGACCTACAC CTCGCACGCA
TCGCACCAGG TGTTCCTGCG CGAGTACACG CTGGTGGGCG GACGGCCGGA GTCGACCGGT
CGCCTGCTCG ACGGCGCGGT CGAAGGCTCG ATCGGCAACT GGGCCGAAGT GAAGGCCCAG
GCGCTGATGC TGGGCATCCG GCTGACCGAC GCCGACATCG GCAACGTGCC CGTGCTGCTG
ACCGACGAAT ACGGCAAGTT CATCCCGGGC AGCAACGGCT ACGCGCAGCT GGTGATGGCC
AACGGCAGCA TCGTCCAAGG CACTGCGGCC GGGATCCTGA CCACGGGATC GGCCAAGACC
GGCCACGCCT TCCTCGACGA CATCGCCCAC CACGCGGTCC CGGGTTTCGT CGACACCAAC
CGCGACGGGA TCCAGAACAA CGGCGAACTC TCGCAGACGC CCGATACCGA CACGGGCGAT
GTGAACCTCG ACGGCGTGGT CAACGAGGCC GACCTGACCG CAGACGACCG CATTGCCGGC
ACCTACGACA ACGAACTGCT CGACCGTCAC TTCATCACCG GCGACGGCCG TGGCAACGAG
AACATCGCGC TGACCGCGGT GCACAGCGTC TTCCACTCCG AGCACAACCG GCTGGCCGAG
CAGATCAAGG AACTGGCCGT CTCGAGCAAC GACGTGACGT TCCTGAACCA GTGGCTCGAC
ACCCCGGTGG CAGCGGTTCC GACCACGCAG GCCGGCGTCG ACGCGCTCAA CTGGAACGGC
GAGCGCCTGT TCCAGGCCGC CCGCTTCGGC ACCGAAATGC AGTACCAGCA CTTCGTGTTC
GAGGAGTTCG CCCGCAAGGT GCAGCCGTCG ATCGACGTCT TCAGCGGCTA CAACAGCACC
GTCGACCCGG CCATCATGAG CGAGTTCGCC AACGTGGTGT ACCGCTTCGG CCACTCGATG
CTGACCGAGA CGGTCGACCG CATCGACCCG CTCACCGGCG AATCGAACCC GATCGGCCTG
ATCGAAGCCT TCCTGAACCC GGTCGAGTTC GGTGCCGGAA CCACCACCAC CGCCGAAGCC
GTCGGCAACA TCGTCACCGG CATGACGCGC CAGACCGGCA ACCACATCGA CGAGTTCATC
ACCGAGGCGC TGCGCAACAA CCTGGTCGGC CTGCCGCTCG ACCTGGCGGC CCTGAACATC
GCCCGCGGCC GCGACACCGG CATCCCCGGC CTGAACGCGG CACGTGCCAT GTTCTTCGAG
GACACCGGCC TGTCGAGCCT GCAGCCGTAC GACAGCTGGT CCGACTTCGG CCTGGGCATC
AAGAACCCCG AATCGCTGGT GAACTTCATC GCCGCCTACG GCACCGACGC CAGCATCACC
GGCGCGACCT CGCTGGCTGA CAAACGTGCG GCCGCGCAGG CGATCCTCGA CGCCGCCGAG
CTCGGTGATG CAGCCGCCCT GGCCTTCCTC GAAGGGCCCG CGGCGACCAC CGGCGTCAAC
GACATCGACT TCTGGATCGG CGGCCTGGCC GAAGTCACGC AGCCCTTCGG CGGCATGCTC
GGCACGACCT TCGACTACGT CTTCTCGACC ACCCTGCTGC AGCTGCAGAA CAACGACCGC
CTCTACTACC TGGCCCGCAC CGCCGGCCTG AACGTGCTGA CGCAGCTCGA AGAAGGATCG
CTCGCCGAGC TGGTGATGCG CAACTCGACG GCCAAGCACC TGCCGGGCGA CATCTTCTCG
ACGCCGACCT ACATCTTCGA AGTCGGCACG ATGAACCCGA CCGGGCGCCC CCTGTCGGAC
GACCCGAGCA CGCCCGACGT CAACGAATCG CTGCTGCTGA CGCGCATGGC CGACGGCACC
ATCCGCTATG CCGGTGCCGA GCACATCCTG ATGGGCGGCA CCGATGGCGC CGACCGCCTG
CGCGCCGGTG CCGGTGACGA CACCCTGCAC GGCGACGCCG GCAACGACCG GCTCGAGGGC
GGCGCCGGCA ACGACTTCTT CTTTGCCGGC GAAGGCGACG ACATCCTCAC CGACAGCTTC
GGTGACGACA ACATGAAGGG CCAGGGCGGC AACGACGTCA TCAGCAACAG CGGCGGCTTC
GACCTGCTGT TCGGCGGCGA CGGCAAGGAC TTCATCCTCG GCGGCCAGGG CGATGCCGAA
TCCTTCGGTG GCCACGGTGA CGACTTCATC CACGCCGGCA CCGGCATCAA CACCGTCTTC
GGCGATTCCG GCAACGACTG GATCGAAGGC GGCGACGGCG CCGACCTGCT GCAGGGCGAC
AACGGCGACC CGTTCCAGCA GAGCACCATC ATCGGCCACG ACGTGCTGCT CGGCGACGGC
AACGACGACT ACGACTCCGA GTCGGGCGAC GACATCATGT TCGGCACACC GGGCACCAAC
CGGGCCGAAG GCATGCTGGG CTTCGACTGG GTGACCTACG CCCGCTCGAC CGAACTGGTC
GACGCCGACC TGAACCGCAC CGCGCTGCTG CCGCCCGACC TCGACAACAT CAACGACCGC
TTCGACAACG TCGAGGGCCT GTCGGGCTGG AACGGCAACG ACCTGCTCAA GGGCAGCAGC
CTGCTCGATG TCGACCTCGA CGGCCATCGG CTCGACGCCG CCGGCGTGGC ACGCATCGCC
GGCCTGGGCA ACGTGCTGGG CGCCAGCAAC GTCATCAGCC CCGACGGCCT GATCCACCTC
AACGGCGACA TCCTGCTCGG CGGCGGCGGC GCAGACATCA TCGAAGGCCG CGAGGGTGAC
GACGTCATCG ACGGCGACGC CTGGCTGAAC GTGCGCATCA GCGTGCGGGC GGCCAACAAC
CCGAACCTGG AAATCGCCAG CCACAACAGC ATGGCCGGCC TGACCGCGAG CATGCTCAAC
GGCAGCATCA ACCCGGGCCA GCTGGTGATC GTGCGCGAGA TCCTGAACAC CGCCGGCGTC
GGTGACGTGG CCGTGTTCAC CGGCGCACGT GCCGACTACA CCATCGGCGC GCTGCAAGCC
GATGGCAGCC GGCTCGTCAC CGACAACGTC GGAACCGACG GCGTCGACCG GATCCGCAAC
ATCGAGATCC TGCGTTTCAG CGATGGCGAC CTGCTCATCG GCGGGGGCAA CGCGGCAGCC
ACCGGCACCC CGACGATCAC CGACACCACG CCGACCGAAG GCAGCGCCAC CACGGTGCTG
ACCAACACCA TCGGCGACAC CAACGGCCTG GGCACCTTCA GCTTCCAGTG GCAGACCTCG
CCGGACGGCA CCCCTGGTTC GGTATGGACC AACGTGGGCA CCAACACGGC CGCATTCACC
CCTGCGCAGG CCCAGGTCGG CCAGTTCCTG CGGGTGACGG TGAGCTTCAC CGACGGACAG
GGCAACCTCG AGTCGCTCAC GTCGGCGCCC ACCTCCGTGA TCGGCGACCT GTTCGGTGGC
ACGGCCGCTG CCGACGTCTT CAACGGCACG GCCGGCGCGG ACAACGCCGC GGGCGCCGGT
GCGGCAGACA CCCTCAACGG GCAGGCCGGC AACGACACCC TCAACGGTGG CGCAGGCAAC
GACACCCTCA ACGGTGGCAC GGGTGCCGAC AGCATGACCG GTGGCGGTGG CAATGACACT
TTCTTGGTCG ATGACGCCGG TGACGTGGTC GTCGAGGGCA ACGGCGGCGG CACGGACACC
GTGCAGGTGC AGTCGCTGCT GAATGCCTTC ACGCTGGCAG CCAACTTCGA GAACCTGCTG
GTCGTCGGCG CCACCAACTT CGCCGGAACG GGCAACGGAG TCGGCAACAC ATTGACCGGC
GGTACCGGCG GCGACACGCT CAGCGGCCTC GGCGGCGCGG ACGTGCTCAA CGGCGGCGAC
GGCAACGACG TGCTGCTGGG CGGCGCAGGT GCGGACGACC TGACCGGTGG CGTGGGTGCG
GACACGATGA CCGGCGGTGC CGGCGCAGAC AACTTCATCT ACACCAACGT CGACCAATCG
ACTGCGGCGC TGCGCGACCT CATCATCGAC TTCGGCGCCA CCGACGACAT CGACCTGGGC
GCGATCGACG CCAATGCAGG CACCGTCGCC AATAACGCCT TCTCGTTCAT CGGCACGGCG
GCGTTCGGCG CCAACGCGAC CGGTCAGTTG CGCTACTCCT TCGTCGGTGC CAACACCTTG
GTCGAGGCGT CCAACGACGC CGACGCGGTG GCCGAGTTCT CGTTGCTGCT GCAGGGCAAC
CTGAACCTGG TCGCCGGCCA GTTCGTGGTG TAA
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| Protein sequence | MQLVRHDLEF ILQQIFIAEA HAAGGDLLTL VTSPLLPYGL RTVDGSHNNI VPGQEEFGAA
DRPMPNALQQ FFRTAEMGDV DGPGPGGLVQ TTYANATGGL VFDSQPRVIS NLISDQTITN
QAAVDVATRF ADGEPVVISD EGTYFIQNVA PDEGLSAPFN SWFTIFGQFF DHGLDLIGKG
AGTVFIPLKP DDPLIAGDDG ILGNADDLPP QLQFMALSRA AASNIAPGAD GVVGTSDDVR
TFSNSTTPWI DQNQTYTSHA SHQVFLREYT LVGGRPESTG RLLDGAVEGS IGNWAEVKAQ
ALMLGIRLTD ADIGNVPVLL TDEYGKFIPG SNGYAQLVMA NGSIVQGTAA GILTTGSAKT
GHAFLDDIAH HAVPGFVDTN RDGIQNNGEL SQTPDTDTGD VNLDGVVNEA DLTADDRIAG
TYDNELLDRH FITGDGRGNE NIALTAVHSV FHSEHNRLAE QIKELAVSSN DVTFLNQWLD
TPVAAVPTTQ AGVDALNWNG ERLFQAARFG TEMQYQHFVF EEFARKVQPS IDVFSGYNST
VDPAIMSEFA NVVYRFGHSM LTETVDRIDP LTGESNPIGL IEAFLNPVEF GAGTTTTAEA
VGNIVTGMTR QTGNHIDEFI TEALRNNLVG LPLDLAALNI ARGRDTGIPG LNAARAMFFE
DTGLSSLQPY DSWSDFGLGI KNPESLVNFI AAYGTDASIT GATSLADKRA AAQAILDAAE
LGDAAALAFL EGPAATTGVN DIDFWIGGLA EVTQPFGGML GTTFDYVFST TLLQLQNNDR
LYYLARTAGL NVLTQLEEGS LAELVMRNST AKHLPGDIFS TPTYIFEVGT MNPTGRPLSD
DPSTPDVNES LLLTRMADGT IRYAGAEHIL MGGTDGADRL RAGAGDDTLH GDAGNDRLEG
GAGNDFFFAG EGDDILTDSF GDDNMKGQGG NDVISNSGGF DLLFGGDGKD FILGGQGDAE
SFGGHGDDFI HAGTGINTVF GDSGNDWIEG GDGADLLQGD NGDPFQQSTI IGHDVLLGDG
NDDYDSESGD DIMFGTPGTN RAEGMLGFDW VTYARSTELV DADLNRTALL PPDLDNINDR
FDNVEGLSGW NGNDLLKGSS LLDVDLDGHR LDAAGVARIA GLGNVLGASN VISPDGLIHL
NGDILLGGGG ADIIEGREGD DVIDGDAWLN VRISVRAANN PNLEIASHNS MAGLTASMLN
GSINPGQLVI VREILNTAGV GDVAVFTGAR ADYTIGALQA DGSRLVTDNV GTDGVDRIRN
IEILRFSDGD LLIGGGNAAA TGTPTITDTT PTEGSATTVL TNTIGDTNGL GTFSFQWQTS
PDGTPGSVWT NVGTNTAAFT PAQAQVGQFL RVTVSFTDGQ GNLESLTSAP TSVIGDLFGG
TAAADVFNGT AGADNAAGAG AADTLNGQAG NDTLNGGAGN DTLNGGTGAD SMTGGGGNDT
FLVDDAGDVV VEGNGGGTDT VQVQSLLNAF TLAANFENLL VVGATNFAGT GNGVGNTLTG
GTGGDTLSGL GGADVLNGGD GNDVLLGGAG ADDLTGGVGA DTMTGGAGAD NFIYTNVDQS
TAALRDLIID FGATDDIDLG AIDANAGTVA NNAFSFIGTA AFGANATGQL RYSFVGANTL
VEASNDADAV AEFSLLLQGN LNLVAGQFVV
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