Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_2296 |
Symbol | |
ID | 6160861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2485769 |
End bp | 2486953 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641665066 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_001791327 |
Protein GI | 171058978 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGA CCGTCCTGGT GATCGATGAC TCGAGCGTGC TGCGCGACAT CATGCGAGAG GTGCTGGAAG ACGCCGGTTT CAATGTCATC GAAGCACCGC ACGGCCAGCT CGGGCTGGAG CGGGCCCAGC AGCTGGCACC CGACATCGTG CTGTGCGACA TCAACATGCC GGTGCTCGAC GGCTACGGCT TCGTGCAGGC CGCGCGCGCC CACGAACACC TGCGCACGGT GCCGATCCTG ATGGTCACGG CGATGGCCGA GAAGAAGTCG ATGCGCCGCG CGATGGAGGC CGGCGCGGAC GACTTCCTGA GCAAGCCGTT CACGCCCGAA GAACTGGTGT CGGCGGTGAC CGGCCAGCTG GCGCGGCGCG AGCGCCACGA GGCCGACACC GAGCGCAGTC TCGATCGCCT GCGCGGTGCG CTGCTGACGT CGGTGCCGCA CGAGTTGCGC ACGCCGCTGA CCAACATCCT CGGCTATTCG CAGCTGCTGA TCGCGCGCGG CGGGCGCATC TCGGCCGATC AGCAGGCCGA CATGCATCGC CACATCCACG ATTCGGCGCA GCGGCTGTCG CGCACCATCG GCCGCTACAT GGCGTGGTCC GAACTGAATG CGGCGCGCGG CGGCGGCCAG TTGCGCTCGG GCGAGCGGGT CGACGCCCAC GGACTCACCG ATGTGCTGGC CAGCAAGGCG TTCCGCACCC TGGTGCTCGA CAGCCTGCCC GGCGAATGGG CCAGCCTGCC GAGCAACGAC CGGATGCTGG CTGGCCGCCT GCTGCGTTTC GACCTGGCGC CGGCACAGAT CCATTGCCAT TGCGACGACC TGCTGCGCGT GCTGGCGGAG TTGATCTCCA ACGGCATCAA GTTCTCGGTG CCGGGCGCCA CGGTTTCGCT CGAAGGCCGC ATGCAGCCGG GCGGCGATTA CCACGTCGAC GTGCGCAACC ACGGCCCGGC CTTGCCCGCG CAGGTGCAGA AGGTCAGCGG CGCGCTGATC CAGTTCGGTC GCGAGCAGCA CGAGCAGCAA GGCAGCGGCC TCGGCCTGGC GCTGTGCGGC CTGCTGGCGC AGCGCAACGG TGCGGGGGTG CAGTGGGTTC GCACCGATGG TGCGCCGAAC GTGGTGCGCC TGAAGCTGGC GGCCCGCGCG GTGGCCGAAC CGCAGGCTGG CAGTGAGGCG TCGGCTGCCG CCTGA
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Protein sequence | MNKTVLVIDD SSVLRDIMRE VLEDAGFNVI EAPHGQLGLE RAQQLAPDIV LCDINMPVLD GYGFVQAARA HEHLRTVPIL MVTAMAEKKS MRRAMEAGAD DFLSKPFTPE ELVSAVTGQL ARRERHEADT ERSLDRLRGA LLTSVPHELR TPLTNILGYS QLLIARGGRI SADQQADMHR HIHDSAQRLS RTIGRYMAWS ELNAARGGGQ LRSGERVDAH GLTDVLASKA FRTLVLDSLP GEWASLPSND RMLAGRLLRF DLAPAQIHCH CDDLLRVLAE LISNGIKFSV PGATVSLEGR MQPGGDYHVD VRNHGPALPA QVQKVSGALI QFGREQHEQQ GSGLGLALCG LLAQRNGAGV QWVRTDGAPN VVRLKLAARA VAEPQAGSEA SAAA
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