| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2294 |
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| Symbol | |
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| ID | 6160859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2483446 |
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| End bp | 2484573 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665064 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001791325 |
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| Protein GI | 171058976 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGC TTGTCACGGG TGCGGCCGGT TTCATCGGCA TGCACGTTGC TCAGGCGTTT
CTTGCGCGCG GTGACGAAGT GGTCGGCATC GACGACCTGA GCGATCAATA CGAGGTGGCG
CTGAAGTACG CGCGACTGTC GCGCATCCAG TCGCATCCGC GATTCCGTTT CCTGAAGATG
GACGTGTCGG ACCGGCCGGC CGTGAATGCG TGCTTTGCGG CGAACGGCTT CGAGCAGGTG
GTCCATCTGG CCACCCAGGC CGGTGGCGGG CGGGCGGTGA GCCACCCGCG CGAAAGCGCC
CAGCCGAATC TGGTCGGCTT CATCAACATG CTCGAAGGCT GCCGCCAGCA CGGCGTGCCG
CACATGGTCT ATGCCAGCAG TTCGAACGTC TACAGCGGCC TGCGGCAGAT GAATCTGGCC
AGTCGCAACC TGCACGGGCC GTCGGCCAGC GAGGTCGAGG CGCACAAGAT GCCCAACGAA
CTGATGGCGC AGACCTACAG CCGGCTTCAC GGCCTGGCGA CCACGGGGTT GCGCTTCTTC
ACGGTCTACG GCCCGTGGGG ACGTCCGGAC ATGGCTTATT ACGGTTTCAC GCGCGCGCTG
CTGGCGGGTG ACCCGATTCC GTCGACGCAT GGTGGCGCGG TCAGCCACGG CCTGACCTAT
GTGGACGACA TCGTCGCCGG CATCCTGCAG GCGCTGCGCC TGCCGTCGCG CACGATGGCC
GACGAACGAG CCCATCCCGG TGCCCAGGCG CGGGTGCTCA ACATCGGCAG CCACGATCCG
GTCCGGCTGC TCGATTTCGT GGCGGCACTC GAGAACGCAG TCGGTCGCGA GGCCGAACTC
AAGATGATGC CGATGAACTT CGACGATGCC GGCGTGCCGG TCGACACCAC GTTGCAGCGT
CAGCCCGATC TGGTCGGCGA ACGACGTTCC ACCATGCCGC TGGCCGAGGG TGTGCAGCGC
TTCGTCCACT GGTATCTGGG CTACCACGGG CTGCGCTCGG GCAAGGAGCC CTCGGCACAG
CGCCGGGCTG CGGTCTTCGA GGATCCGTCG TCGGTCCAGA TGATGCCGGC GTTGCGCAGC
CTGATCAGCC GGTCGACGCA GGGCCAGCAC ATCGGCGGCG CTCATTGA
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| Protein sequence | MKVLVTGAAG FIGMHVAQAF LARGDEVVGI DDLSDQYEVA LKYARLSRIQ SHPRFRFLKM
DVSDRPAVNA CFAANGFEQV VHLATQAGGG RAVSHPRESA QPNLVGFINM LEGCRQHGVP
HMVYASSSNV YSGLRQMNLA SRNLHGPSAS EVEAHKMPNE LMAQTYSRLH GLATTGLRFF
TVYGPWGRPD MAYYGFTRAL LAGDPIPSTH GGAVSHGLTY VDDIVAGILQ ALRLPSRTMA
DERAHPGAQA RVLNIGSHDP VRLLDFVAAL ENAVGREAEL KMMPMNFDDA GVPVDTTLQR
QPDLVGERRS TMPLAEGVQR FVHWYLGYHG LRSGKEPSAQ RRAAVFEDPS SVQMMPALRS
LISRSTQGQH IGGAH
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