| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2255 |
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| Symbol | |
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| ID | 6163256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2458858 |
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| End bp | 2459877 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641665025 |
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| Product | RNA-directed DNA polymerase (Reverse transcriptase) |
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| Protein accession | YP_001791286 |
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| Protein GI | 171058937 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TCGGCAACCT CTATGCCCAA GCCACCTGCC TGGATGCGCT GCACCAAGGC
TATGTGGACG CCCGCAAGGG CAAGCGCGCC CGCTTCGCCT GCCACGCCTT CGAGCGCCGC
CTGGGTGCCC AGCTCAGCGA TCTGGCGCAG AGCCTCGAGG CCGGCACCTA CGCGCCGCGG
CCCTACAACA CCTTCATGGT CCATGAGCCC AAGCCGCGCG AGATCAGTGC GCCGGCCTTT
CGTGACCGCG TCGTGCAGCA CGCGGTCTAC AACGTCATCC AGCCCATTTT CGATCGCACG
TTCATCGATC AGAGCTTTGC CTGCCGGCCC GGCGCCGGCA CCCATGCTGC TGCCGACTAC
GTGCAGCACG GCATGCAGAT CAGCAGGCCC GACAGCTACA CGCTGCACCT CGACGTGCGC
CGCTTCTACT ACTCGATCGA CCGCGGCATC CTGCGTGCGC TGGTCGAGCG CAAGCTCAAG
GACCGGCGCC TGGTCGACCT GATGATGGCG TTTGCCGAGA TGCCTGGGCC TGTCGGCCTG
CCGATCGGCA ATCTGCTGTC GCAGCTGCAC GCGCTGATCT ACCTCAACCC GCTGGACCAC
TACATCAAGC GCGAGCTGGG CGTGCGGCTC TACTGCCGCT ACGTCGACGA CTTGCTGTTG
CTCGACCTGA GTCGAGACGA GGCCATCGCT CACCGTGATG CGATCGAGCA CTACCTGGCG
GATCACCTCA GGCTGCAGCT CAGCAAGGCC ACGATGGCAC CCACGCGCCG CGGGGTCAAC
TTCGTCGGCT ACCGCACCTG GGCGAGCCGC CGGTTCGTCC GCAAGCATGC GCTGAGCACG
TTCCGCCAGG CCGCGCGGCG GGGGGATCTG CAGTCCGTCG TGTCGAGCCT CGGGCATGCC
CTCAAGACCG CATCACACCA CCACATGGTC AACCACCTGC AGGAGCACCA CCATGCCCTC
CATCATCAGC TACCGAAAAG TCACCGACGC CTACACGACC CATGCGCTGC GGCTGCCTGA
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| Protein sequence | MKRIGNLYAQ ATCLDALHQG YVDARKGKRA RFACHAFERR LGAQLSDLAQ SLEAGTYAPR
PYNTFMVHEP KPREISAPAF RDRVVQHAVY NVIQPIFDRT FIDQSFACRP GAGTHAAADY
VQHGMQISRP DSYTLHLDVR RFYYSIDRGI LRALVERKLK DRRLVDLMMA FAEMPGPVGL
PIGNLLSQLH ALIYLNPLDH YIKRELGVRL YCRYVDDLLL LDLSRDEAIA HRDAIEHYLA
DHLRLQLSKA TMAPTRRGVN FVGYRTWASR RFVRKHALST FRQAARRGDL QSVVSSLGHA
LKTASHHHMV NHLQEHHHAL HHQLPKSHRR LHDPCAAAA
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