| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2223 |
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| Symbol | |
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| ID | 6160633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2426053 |
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| End bp | 2426844 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641664993 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001791254 |
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| Protein GI | 171058905 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0935635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGC AACAGATCGT GATGCAGGCC CGCGGCCTGG TCAAACGCTA CGGCCAGGTC
ACCGCCCTCG ACGGCGCCGA CTTCGAACTG CGCGCCGGTG AGATCCTGGC GGTGATCGGC
GACAACGGCG CCGGCAAGTC CAGCCTGATC AAGTGCCTGT CGGGGGCGAC GATTCCCGAC
GAGGGCACGA TCGAACTCGA CGGCAAGCCG ATCCACTTCA AGAGCCCGAT GGACGCCCGC
AAGGTCGGCA TCGAGACGGT CTATCAGGAC CTCGCCGTGG CCCCGGCCAT GACGATCGCC
GAGAACCTGT TCCTGGGCCG CGAACTGCGC CGCGAGGGTT TTGCCGGCAA CGTGCTGCGA
ATGCTCGACA AGAAGAAGAT GCTCGAGCAG AGCATCGCCC GCATGAACGA CCTGAAGGTC
GGCATCCGCT CGATGCTGCA GGCGGTGGAG ACCCTGTCGG GCGGCCAGCG CCAGTGCGTG
GCGGTGGCGC GTGCGGCGGC GTTTGCCGAG CACGTCGTGA TCCTCGACGA GCCGACCGCG
GCGCTGGGTG TCAAGGAGGG CAACATGGTG CTCGAACTGA TCCGCCGGGT GCGTGACAAG
GGCCTGCCGG TGATCCTGAT CAGCCACAAC ATGCCGCACG TGTTCGAGAT CGCCGACCGC
ATCCACGTGG CGCGGCTGGG CAAGCGCTGC GCGGTGCTCA ACCCCAAGAA GATCAGCATG
AGCGACACCG TGGCGGTGAT GACCGGGGCG ATGCCGCCGG AAAAGATCCC CGCCGAATAC
CTGGCGCACT GA
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| Protein sequence | MATQQIVMQA RGLVKRYGQV TALDGADFEL RAGEILAVIG DNGAGKSSLI KCLSGATIPD
EGTIELDGKP IHFKSPMDAR KVGIETVYQD LAVAPAMTIA ENLFLGRELR REGFAGNVLR
MLDKKKMLEQ SIARMNDLKV GIRSMLQAVE TLSGGQRQCV AVARAAAFAE HVVILDEPTA
ALGVKEGNMV LELIRRVRDK GLPVILISHN MPHVFEIADR IHVARLGKRC AVLNPKKISM
SDTVAVMTGA MPPEKIPAEY LAH
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