| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2222 |
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| Symbol | |
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| ID | 6160632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2425094 |
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| End bp | 2426053 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641664992 |
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| Product | monosaccharide-transporting ATPase |
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| Protein accession | YP_001791253 |
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| Protein GI | 171058904 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACACCT TGAAAGACAA GCTGCCACCG ATCAGCCAGC TCGGGCCGTT CATCGCCCTG
GCGATCGCGT GCGCCATCTT CGGGATCACC ACCGACAACT TCTTCAGCGG CGCCAACTTC
TCGCTGATCC TGCAACAGGT CATGGTGGTC GGCGTCATCG CGATCGGCCA GACCCTGATC
ATCCTCACCG CCGGCATCGA CCTCTCGTGC GGCATGGTGA TGGCACTGGG CAGCATCGTG
ATGACCAAGG TGGCCGAAGA CTTCGGCCTG CCCGCACCGC TGGCCATCCT GCTGGGCATC
TCGGTGACCG CCGCATTCGG CCTGATCAAC GGCCTGCTCG TCACCCGCAT CAAGCTGCCT
CCGTTCATCG TGACGCTGGG CACCTTCAAC ATCGCCTTCG CCGTCACCCA GCTCTATTCG
GGCGCTCAGA CCGTCACCCA GGTGCCGGAG ATGATGACCT GGCTGGGCAA CACCTTCCGC
ATCGGTGGCA CCTCGGTCGC CTACGGCACC GTGTTCATGA TCGCGCTCTA CCTGGGCGCC
TGGTTCTGGC TGCGTGAAAC CGCCTCCGGC CGCCACGTCT ACGCGGTCGG CAACAACCCC
GAGGCGACCC GGCTGGTCGG CATCCCGACC GAACGCGTGC TGCTGTGGGT CTACGTGCTC
GCCGGCGTGT TCTACGGCGT CGCTTCGCTG CTGTCGGTGG CCCGCACCGG CGTGGGTGAC
CCCAACGCCG GCCAGACCGA GAACCTCGAC GCCATCACGG CAGTCGTGCT CGGCGGCACC
AGCCTGTTCG GCGGGCGCGG CGTGATCCTC GGCTCGCTGG CCGGTGCGAT CGTCGTCGGT
GTGCTGCGCA ACGGCCTGAC GCTGATGGGT GTGTCGTCCG TCTATCAGGT GCTGATCACC
GGTATCCTGG TGATCGTGGC GGTCACTGTT GACCAACTTT CTCGCAAGGG AGGCCGCTGA
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| Protein sequence | MNTLKDKLPP ISQLGPFIAL AIACAIFGIT TDNFFSGANF SLILQQVMVV GVIAIGQTLI
ILTAGIDLSC GMVMALGSIV MTKVAEDFGL PAPLAILLGI SVTAAFGLIN GLLVTRIKLP
PFIVTLGTFN IAFAVTQLYS GAQTVTQVPE MMTWLGNTFR IGGTSVAYGT VFMIALYLGA
WFWLRETASG RHVYAVGNNP EATRLVGIPT ERVLLWVYVL AGVFYGVASL LSVARTGVGD
PNAGQTENLD AITAVVLGGT SLFGGRGVIL GSLAGAIVVG VLRNGLTLMG VSSVYQVLIT
GILVIVAVTV DQLSRKGGR
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