| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2215 |
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| Symbol | |
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| ID | 6160980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2417835 |
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| End bp | 2418779 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664984 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001791246 |
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| Protein GI | 171058897 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.50368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACT TCAACCTGCG CCACCTGCGG ATATTCGAGA CCATCGCCAG CTGCGGCAGC
TTTTCGCGCG CCGCCGAGCA GCTCGGCATG AGCCAGCCGG CGGTGTCGAT GCAGCTGCGC
CAGCTCGAGA CCGACCTCGG CACGCTGCTG TTCGAGCGCC CGCAGCGCCA GCGCCTGACC
GATGCCGGGC AGGATCTGCT GCAGCACGCC CGGGTGATCC TGGCCCAGGT GCGCGCCACC
GAAGACGCGA TGGCGGTGCA CGAGGCCGAG GCCAGCGGCG CTTCGGCGGC GGGCGCCCGG
GGCCCGCGCG GGCTGCTGCA CCTGGGCGTG GTGTCGACCG CGCACTACTT CGCGCCACGG
CTGCTGAGCG AGTTCCACCG CCGTCATCCC GAGGTGCGGC TCAAGCTCAC GGTCGCCAAG
CGCAGCGAGG TGCTGGCGAT GCTGCAGGAG CACCGGCTCG ACATCGCGAT CACCGGCTAT
CCGCCGTCCG AGGCCGACCT GGAGGCGGCC AGCTTCGCGC GCCATCCGCA CTGCATCGTC
GCCCACCCCG GTCACGCGCT GGCGCGGCGT CGCGGCCTGG CGTGGGCCGA TCTGCGCGAC
GAGGAGTTCA TCTTCCGCGA GGGCGGTTCG GCGACGCGGC AGTTCCTGGA ACACCTGCTG
CAGTCGCAGT CGATCCAGAT CAAGCGCGGC ATGGAACTGG CCGGCAACGA GACCATCAAG
CAGGCGGTCA TGTGCGGCAT GGGCATCAGC TTCCTGTCGG CCCACACCTT CCAGGTCGAG
CTCGGCGCGG GGCTGATGGC GGTGCTCGAC GTGCAGGGCA TGCCCAAGCT GATCGACTGG
TGTTTCGTGC AACGCCGCGA CACCTTGCTG ACCGGCGCGA ATGCGGCGTT CCGGCAGTTC
GTGTTCGAGG AAGGCGCGAC GCTGGCGGCC TGCCGGGTGG CCTGA
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| Protein sequence | MKDFNLRHLR IFETIASCGS FSRAAEQLGM SQPAVSMQLR QLETDLGTLL FERPQRQRLT
DAGQDLLQHA RVILAQVRAT EDAMAVHEAE ASGASAAGAR GPRGLLHLGV VSTAHYFAPR
LLSEFHRRHP EVRLKLTVAK RSEVLAMLQE HRLDIAITGY PPSEADLEAA SFARHPHCIV
AHPGHALARR RGLAWADLRD EEFIFREGGS ATRQFLEHLL QSQSIQIKRG MELAGNETIK
QAVMCGMGIS FLSAHTFQVE LGAGLMAVLD VQGMPKLIDW CFVQRRDTLL TGANAAFRQF
VFEEGATLAA CRVA
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