| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2170 |
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| Symbol | |
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| ID | 6163502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2375075 |
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| End bp | 2376169 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664938 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791201 |
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| Protein GI | 171058852 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2855] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.242299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCGC CCACCGCCAT GACGCCGATG CCCGACACGA TCCAGCCGGC GCAGGCTCAA
CCCGTGAGCC AGGGCCTGGC GCAGCGCGTG GGCCATTCCC TGGTCACGAG CCGCAGCCAG
CTCGGCCGGC TGTTCCCCGG CCTGCTCGCC AGCGCCGTGG TGGCCACGGC GGCAAGCTTT
TTGGCCGAGC ACTACGGCGC GCCGGTGATG CTGTTTGCGC TGCTGCTCGG CCTGGCGATG
AACTTCCTGT CGGTCGAAGG GCCGTGCAAA CCCGGCATCG AATTCACCGC CCGCCACGTG
CTGCGCTGGG GCGTGGCGCT GCTGGGCCTG CGCATCACCT TCGCCCAGGT CGCCACGCTC
GGCTGGGGGC CGGTGGTGAT GGTGCTGATC AGCGTGTCGG TCACGATCGG CGTGTCGATG
GCGGTGGCGC GCGCGATGGG CTTCAAGCCG CTGTTCGGCC TGCTCTCGGG CGGCGCCACC
GCGATCTGCG GCGCCTCGGC CGCGATGGCC CTGTCGGCCG CCCTGCCCGC CCACCCGCTG
AAGGAACGCG CCACGCTGTT CACCGTGATC GGCGTGTCGG CGCTGTCGAC CGTCTGCATG
GTGCTGTACC CGATGCTGGC GCGTGCGCTG GGCCTGCCGC CGGTCGACGC CGGCGTCTTC
ATCGGCGGCA CCATCCACGA CGTGGCCCAG GTGGTCGGCG CCGGCTACAG CCTGTCCACC
GAAGCCGGCG ACGCCGCCAC GCTGGTCAAG CTGATGCGCG TGGCGATGCT GCTGCCGGTG
ATCCTGTTCG CCTCGCTGAT CACGCGCTGG CGCGGCGGCG AGGGCACGGG TGAACGCCCG
CCGATCCTGC CGTGGTTCGC CGTCGGCTTT GCGCTGCTGC TGGCGGTCAA CAGCACCGGC
TGGGTTCCGA AGCCGGTGAT CGGGCTGGGC AACGAGGCAT CACGCTGGTT CCTGGTCGCC
TCGATCGCGG CGATCGGGAT GAAGACGCAG CTCGCGCAAC TGGTGAGCGT GGGGATCAGG
CCGATCGTGT TGATGGTGGG GGAGACGGTG TTTCTGGCGG GGTTGGTGTT GGGGTTGTGG
CGGTGGTTGG GGTGA
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| Protein sequence | MAAPTAMTPM PDTIQPAQAQ PVSQGLAQRV GHSLVTSRSQ LGRLFPGLLA SAVVATAASF
LAEHYGAPVM LFALLLGLAM NFLSVEGPCK PGIEFTARHV LRWGVALLGL RITFAQVATL
GWGPVVMVLI SVSVTIGVSM AVARAMGFKP LFGLLSGGAT AICGASAAMA LSAALPAHPL
KERATLFTVI GVSALSTVCM VLYPMLARAL GLPPVDAGVF IGGTIHDVAQ VVGAGYSLST
EAGDAATLVK LMRVAMLLPV ILFASLITRW RGGEGTGERP PILPWFAVGF ALLLAVNSTG
WVPKPVIGLG NEASRWFLVA SIAAIGMKTQ LAQLVSVGIR PIVLMVGETV FLAGLVLGLW
RWLG
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