| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2164 |
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| Symbol | |
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| ID | 6163711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2366218 |
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| End bp | 2367324 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641664932 |
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| Product | glycosyl hydrolase |
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| Protein accession | YP_001791195 |
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| Protein GI | 171058846 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0722696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCT TCCACCCCCA TCGTGTTCTG CTGGCCATCG CCGCGGCCGG CCTGTTGGCG
GGCGGCGTAT TCGCCATCAC CGCAGCGGCG CCGGCCGCGC GCGACGTGCT CGACAGCCCC
GCCATCACCA GCGCGCTGGC CAGCCGCGGG CTGCTCAACG GCTTGGCGCA GGCCGGGGAG
CGGCGCATCG TCGCGGTCGG CCAGCGTGGC CACGTGCTGT GGTCGGACGA CGGCGGCGCG
CGCTGGCAGC AGGCGCAGGT GCCGGTCAGC TCGGACCTGG TCGCGGTCAG CTTTGCCGAT
GCCCGCAACG GCTGGGCGGT CGGCCACGAC GGCGTGATCC TGCACAGCAA CGACGGCGGC
GCCAGCTGGA GCCGCCAGCT CGACGGCCGC GGCCTCGGCG CGCTGTTGAG CGAGGCCTAC
GGCCGCGCCG ACGCCTTGCC CCAGCTCGAT GCGGCCACCC GCAGCACCCT GCTGGCCGAG
GCCGAGCGCC TGAGCGCGCA AGGCGCCGAG CTGCCGTGGC TGGACGTGTG GTTTGCCGAC
GCGCAAAACG GCTACGTCGT CGGCGCCTTC GGCCTGATCC TGCGCACCCG CGACGGCGGC
CAGCACTGGG AGCCGCTGAT GCACGCGCTC GACAACCCGA AGGCGCTGCA CCTGCACGCG
CTGCGGGGTG TCGGCCGCGA GTTCTACATC GTCGGCGAGC AGGGGCTGGT GCTCAAGCTG
GATCGGAAGA ACGACGGGTC CACCGAGCGC TTCCGCCGCG TCGAGCTGCC GTATCAGGGC
AGCCTGTTCG GCGTGATCGG CAACGATCGC GCGGTGCTGG TGCACGGCCT GCGTGGCAGC
GCGCTGCGCA GCACCGACGG CGGCGCGAGC TGGCAGACCG TGGCCACCGG CGTGCAGGCC
GGCCTGACCG CCGCCACGCT GGCCGGCGAC GGCCGCTGGC TGCTCGCCAG CCAGGCCGGC
CACCTGCTGG CCAGCACCGA CGACGGCGCC AGCTTCAGCC CCGTGCGCCT GGCCGGCCCG
CTGCCCGCCG CCGCGCTGCT GAGCCCGGCC GCCGGCCAGA TCGTCATCGC CGGCCCACGC
GGCGTGAGCG CCCAGCCGCT GCCCTGA
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| Protein sequence | MSSFHPHRVL LAIAAAGLLA GGVFAITAAA PAARDVLDSP AITSALASRG LLNGLAQAGE
RRIVAVGQRG HVLWSDDGGA RWQQAQVPVS SDLVAVSFAD ARNGWAVGHD GVILHSNDGG
ASWSRQLDGR GLGALLSEAY GRADALPQLD AATRSTLLAE AERLSAQGAE LPWLDVWFAD
AQNGYVVGAF GLILRTRDGG QHWEPLMHAL DNPKALHLHA LRGVGREFYI VGEQGLVLKL
DRKNDGSTER FRRVELPYQG SLFGVIGNDR AVLVHGLRGS ALRSTDGGAS WQTVATGVQA
GLTAATLAGD GRWLLASQAG HLLASTDDGA SFSPVRLAGP LPAAALLSPA AGQIVIAGPR
GVSAQPLP
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