| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2151 |
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| Symbol | |
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| ID | 6163723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2352365 |
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| End bp | 2353396 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664919 |
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| Product | thiamine pyrophosphate binding domain-containing protein |
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| Protein accession | YP_001791182 |
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| Protein GI | 171058833 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000330573 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCAGC AACCGATCAA GTTCTACCAG ACCGGCACGT TCACCGTCGG TAACCGCCTG
CTCGCCCCCG AGCAACGCAG CGTGCAAGCC AGCACCGAGC GCAGCAACTC CCTCAACTCC
GGCCACCGCG CCTGCCAGGG CTGCGGCGAG GCGCTGGGAG CGCGTTATGC GGTCGATGCC
GCGATGCGTG CCACCGACGG CCAGCTGATC GCCGCCAACG CCACCGGCTG CCTGGAGGTG
TTCTCCACGC CCTACCCCGA AACCTCATGG CAGCTGCCGT GGATCCACTC GCTGTTCGGC
AATGCCGCGG CAGTGGGCAC CGGCATCGCG GCGGCGTTGA AGGTCAAGGC GCAAAAATTG
GCAAAGACAG CCGGCCAGGC CCGCAGCGAC GTGCGCGTGA TCGCCCAGGG TGGCGACGGC
GGCACCACCG ACATCGGCTT CGGTTGCCTG AGCGGCATGT TCGAGCGCAA CGACGACGTG
CTCTACATCT GCTACGACAA CGAGGCCTAC ATGAACACCG GCGTGCAGCG CAGCTCGGCC
ACGCCGCCGG CGGCCCGCAC GGCCACCACG ATGGCAGTGG GCGCGCACCC CGGCGCCGAG
TTCGGCCAGG GCAAGAACCT GCCGCTGATC GCGATGGCGC ACGAGATCCC GTACGTGGCC
ACCGCCACCG TCGCCGACCT GCGTGACCTG GAGGCCAAGG TGGCTCACGC GATGAGCCTG
CACGGCGCGC GCTACCTGCA CATCCTGGTG CCCTGCCCGC TCGGCTGGGG CTCGGCCAGT
CACGACACCA TCAAGCTCGC CCGGCTGGCG CGCGAGACCG GCCTCTTCCC GGTCTTCGAG
GCCGAGCATG GCGAGGTGAC CCACGTGACA AAGATCCGCA ACCGCGTGCC GGTCGAGGAT
TACCTGCGGC CGCAGAAACG CTTCGCCCAC CTCTTCGGCA CGCCCGGGCA GCCGCAGATG
CTGGCGCGGA TCCAGGCCGA TGCGGATCGC AACATCCGCC GCTTCAAGCT GCTCGACGAG
GTGACGGCAT GA
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| Protein sequence | MSQQPIKFYQ TGTFTVGNRL LAPEQRSVQA STERSNSLNS GHRACQGCGE ALGARYAVDA
AMRATDGQLI AANATGCLEV FSTPYPETSW QLPWIHSLFG NAAAVGTGIA AALKVKAQKL
AKTAGQARSD VRVIAQGGDG GTTDIGFGCL SGMFERNDDV LYICYDNEAY MNTGVQRSSA
TPPAARTATT MAVGAHPGAE FGQGKNLPLI AMAHEIPYVA TATVADLRDL EAKVAHAMSL
HGARYLHILV PCPLGWGSAS HDTIKLARLA RETGLFPVFE AEHGEVTHVT KIRNRVPVED
YLRPQKRFAH LFGTPGQPQM LARIQADADR NIRRFKLLDE VTA
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