| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2148 |
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| Symbol | |
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| ID | 6163720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2348815 |
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| End bp | 2350065 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664916 |
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| Product | hypothetical protein |
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| Protein accession | YP_001791179 |
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| Protein GI | 171058830 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000425071 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAACA TCGAACTCAT CTCCGCTGTC GTCTTCGGGC TCGCGCTGCT GCACACGTTT
TCGGTCAAGT TCTTCGAGCA GCTCGCGCAC CGGCATCCCC GGCACGCCGG GCTGTTTCAC
CTGCTCGGCG AGATCGAGGT CGTGTTCGGC TTCTGGGCCT TCGTGCTGAT CGCGCTGATG
GCCTTGGTGG ACGGCGGGCC GCGGGCGATC GCCTACGTCG AGTCGCGGCA ATACACCGAG
CCGCTGTTCG TGTTCGTGAT CATGGTGGTG GCGGCCTCGC GGCCGGTGCT GCAGGCGATC
CAGGCGCTGA TTGCCGGCAT CGCGCGCCGG GCACCCGGGC AGACCGCGGT CATGACGGTG
TGGCTGTGCC TCGCGCTGGT GCCGCTGATC GGCTCGTTCA TCACCGAGCC GGCGGCCATG
ACGCTGGCCG CGCTGATGCT GGCGCCGCGG GTCTTTCGCC CCGGCATGCC CGAGTGGCTG
AAATACGGCG CGCTGGGCGT GCTGTTCGTC AACGTCTCGA TCGGTGGCAC GCTGACCTCG
TTCGCGGCGC CGCCGGTGCT GATGGTGGCC GGCACCTGGG GCTGGGACAG CGCCTTCATG
GCACGGCACT TCGGCTGGAA GGCCGCCATC GCCGTGCTGA TCAACGCCAC GGCGATCACC
TGGCTGCTGC GGCGTCACCT CGCCACGGCT GACGGCGACA GCGCGCCGCC GCAGGTCCAC
CCCGCGTCGA AGACGGTCAG CGCGATCCAC CTGGCGTTTC TGGCCGCGGT GGTCGTGTTC
GCGCATCACC CGGTGATCTT CCTGGGGCTG TTCCTGCTGT TCCTGGGCTT CACGCAGGCC
TACGCGCGCT ACCAGAGCCC GCTGATCCTG AAAGAGGCGC TGCTGGTCGG CTTCTTCCTG
GCCGGGCTGG TGGTGCTGGG TGGCATGCAG CAGTGGTGGC TGCAGCCGAT CGTCTCCAGC
CTCGAACCGA CCGCGCTGTT CTTCGGCGCG CTCGGGCTGA CGGCGATCAC CGACAACGCG
GCGCTGACCT ACCTCGGCTC GCTGATCGAG GGCATGTCCG ACCCGGCCAA GTACATGCTG
GTGGCCGGCG CGGTGGCCGG CGGCGGCCTG ACCGTGATCG CCAACGCGCC CAACCCGGCC
GGCGTGACGC TGCTCAAGCA GGGCTTCGAG GACCAGTCCA TCGGCGCCGG CGGTCTGTTG
GCCGGCGCGC TGTTGCCCAC GATGGTCGCA GCCGCGTTGC TGCTGTCCTG A
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| Protein sequence | MQNIELISAV VFGLALLHTF SVKFFEQLAH RHPRHAGLFH LLGEIEVVFG FWAFVLIALM
ALVDGGPRAI AYVESRQYTE PLFVFVIMVV AASRPVLQAI QALIAGIARR APGQTAVMTV
WLCLALVPLI GSFITEPAAM TLAALMLAPR VFRPGMPEWL KYGALGVLFV NVSIGGTLTS
FAAPPVLMVA GTWGWDSAFM ARHFGWKAAI AVLINATAIT WLLRRHLATA DGDSAPPQVH
PASKTVSAIH LAFLAAVVVF AHHPVIFLGL FLLFLGFTQA YARYQSPLIL KEALLVGFFL
AGLVVLGGMQ QWWLQPIVSS LEPTALFFGA LGLTAITDNA ALTYLGSLIE GMSDPAKYML
VAGAVAGGGL TVIANAPNPA GVTLLKQGFE DQSIGAGGLL AGALLPTMVA AALLLS
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