| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2144 |
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| Symbol | |
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| ID | 6163886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2345211 |
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| End bp | 2346017 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641664912 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_001791175 |
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| Protein GI | 171058826 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.000390984 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATCGTT GGATCGTTGC CGCATTGGCC GCGGGGGTGC TGTGCCCCGC AGGCGCAGCC
GAGCCGGAAC TCCAGGTCTC CCGGGCCGGC GCACGCACGG CCCGCCCGGC ACCGGCCGCG
CACTTCAGCG GTCAGGCGAT GGTGGACATG CGCCATGTGC CCAGCGGCGC GGCGCGAGCC
TCCGTGGGCT CGGTGAGCTT CTCGCCGGGG GTTCGTACCG CCTGGCACAC GCACCCGCTG
GGGCAGACGC TGGTGGTCAC GGCCGGCGCT GGGCAAGTCC AGCGCTGGGG TGGTCCGGTG
GTCGAGATGC GGGTCGGTGA CGTGATCCAC ATCCCGCCGC TGCTCAAGCA TTGGCACGGT
GCCGCACCAG GGGGCGCGAT GACCCATCTG GCCATCACCG AGGCGCAGGA CGGCTCGACC
GTCCAATGGC TGGAGGCCGT GGCCGAGGCC CCAGGCGCAC CGGCACCCGC CACCGCCGCA
TCAGCGGCGC CATCGCGCGC ACAACGCCTG ATGGGCGATG TGGCACCCAA GTTGGCCCAA
CTGACCGACG AAGTCTTGTT GGGCGATGTC TGGACCCGGC CCGGCCTGTC GCCCCGGGAC
CGCAGCCTCG TCACCGTGAG CGCGCTGATC GCGTTGAACA GGCCTGAGCA ACTGCGCTCG
CACCTCGGGC TCGGGCTGAA CAACGGCCTG ACCCGCGACG AGATCTCCGA AGCCCTCACC
CACCTGGCGT TCTACGCCGG TTGGCCCAAT GCCATCACGG CCGCTGGTGT GGCGCGCGAG
GTGTTCGCCG CTGCGCCAAA ACCGTGA
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| Protein sequence | MHRWIVAALA AGVLCPAGAA EPELQVSRAG ARTARPAPAA HFSGQAMVDM RHVPSGAARA
SVGSVSFSPG VRTAWHTHPL GQTLVVTAGA GQVQRWGGPV VEMRVGDVIH IPPLLKHWHG
AAPGGAMTHL AITEAQDGST VQWLEAVAEA PGAPAPATAA SAAPSRAQRL MGDVAPKLAQ
LTDEVLLGDV WTRPGLSPRD RSLVTVSALI ALNRPEQLRS HLGLGLNNGL TRDEISEALT
HLAFYAGWPN AITAAGVARE VFAAAPKP
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