| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2139 |
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| Symbol | |
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| ID | 6162923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2342456 |
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| End bp | 2343211 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641664908 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001791171 |
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| Protein GI | 171058822 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00346625 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGTCC CGATCATCAC CTTCGAGCGC GTCAACAAGT GGTACGGCGA CGCCTTCCAC
GTGCTGCGCG ACATCGATCT CAGCGTGCGC CGCGGCGAGC GCATCGTGAT CTGCGGCCCG
TCGGGTTCGG GCAAGTCGAC GCTGATCCGC TGCATCAACG CGCTGGAGCC GTATCAGGAA
GGCCGCATCG GGGTCGACGG CACCCCGCTC GGCATCGAGG GCCGCGAGGA CGACCGCGCG
GTGCAGGCCG TGCGCCGCCA GGTCGGCATG GTGTTCCAGC AGTTCAACCT GTTCCCGCAT
CTGACGGTGC TGCAGAACCT GACGCTCGCA CCGCTGCACG TGAGCCGCGA GCCCAAGCGC
GAAGCCGAGG CCCGCGCGAT GGCGCAGCTC GAACGGGTGC ACATCGCCGA GCAGGCGCAC
AAGTTTCCGC TCCAGCTCTC GGGCGGCCAG CAGCAGCGGG TGGCGATCGC CCGCGCGCTG
TGCCTGGCGC CCAAGATCAT GCTCTTCGAC GAGCCCACCT CGGCGCTCGA CCCCGAGATG
ATCCGCGAGG TGCTCGACGT CATGATCGAG CTCGCTGGCC AGGGCATGAC GATGGTCTGC
GTCACGCACG AGATGGGTTT TGCCAAGTCG GTGGCCGACC GGGTGGTGTT CATGGACCAG
GGCCAGATTG TCGAGGCGGC GCCGCCGGCG GAGTTCTTCA ATGCGCCGCG CAGCGAGCGG
ACACGCAGTT TCCTGGAGCA GGTGCTGGCG CATTGA
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| Protein sequence | MTVPIITFER VNKWYGDAFH VLRDIDLSVR RGERIVICGP SGSGKSTLIR CINALEPYQE
GRIGVDGTPL GIEGREDDRA VQAVRRQVGM VFQQFNLFPH LTVLQNLTLA PLHVSREPKR
EAEARAMAQL ERVHIAEQAH KFPLQLSGGQ QQRVAIARAL CLAPKIMLFD EPTSALDPEM
IREVLDVMIE LAGQGMTMVC VTHEMGFAKS VADRVVFMDQ GQIVEAAPPA EFFNAPRSER
TRSFLEQVLA H
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