| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2133 |
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| Symbol | |
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| ID | 6161626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2333839 |
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| End bp | 2336271 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664902 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001791165 |
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| Protein GI | 171058816 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00433523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCCCCGCG CCGACAAGCC CCTGACCGGC TACCGCCCGC ACTGGGCCAA GCGCTTCGGG
CCGGCGCCGT TCCTGCCGAT GAGCCGCGCC GAGATGGATG CCCTCGGCTG GGACAGCTGC
GACATCGTCA TCGTCACCGG CGACGCCTAC GTCGACCACC CGAGCTTCGG CATGGCGGTG
ATCGGCCGCA CGCTCGAGGC GCAGGGTTTT CGCGTCGGCA TCATCGCCCA GCCCGACTGG
CAGACCGCCG ACCCGTTCAA GGCGCTCGGC AAACCGAACC TGTTCTACGG CGTGGCCGCC
GGCAACATGG ATTCGATGAT CAACCGCTAC ACGGCTGATC GAAAAATCCG CAGCGATGAC
GCCTACACGC CGGGCGGCCT GGGCGGCAAG CGGCCGGACC GCGCCTCGCT GGTCTACGCG
CAGCGCTGCA AGGAGGCCTA CCCGGAAGTG CCGATCATCA TGGGCGGCAT CGAGGCCTCG
CTGCGCCGCA TCGCGCATTA CGACTACTGG CAGGACAAGG TGCGCCGCTC GATGGTGGTC
GACGCCAAGT GCGACCTGCT GCTGTACGGC AACGCCGAGC GCGCCATCAT CGAGGTGGCG
CACCGCCTGG CCGCGGGCGA GAACGTGCGC CGCATGACCG ACATCCGCGG CACCGCCTTC
GTGCGCCGCT CGGACGACCC GGACGCCGCC GGCTGGTTCG AGATCGACTC CAGCTCGGTC
GACCTGGTCG GTCGCGTCGA CGAACACATC AACCCCTACC AGACCACCGC CGAACAGGCG
GCCGCGCAAG GCAGCACCTG CTCGAAGGAG GAGGGCGCCG CCGCACCGGC AGCAGCCGGC
CCGGCCGCCG ACCCCGAATC GGTCTACAAG ACCATCACCT TCGTCGCCCC GCCCAAGCTC
ACCGGCCGCA TCAAGATGCC GCCGCGCGAC AAGAGCGTGA TCCGCCTGCC CAGCTACGAG
CAGGTTCGCA GCGACCCGGT GCTGTACGCC CACGCCAACC GCGTGCTGCA CCTCGAGACC
AACCCCGGCA ACGCCCGCGC CCTGGTGCAG CGCCACGGCG ACGGCAACAC CGCGCGCGAC
GTCTGGATCA ACCCGCCGCC GATCCCGCTG TCCACGCCCG AGATGGACCA CGTGTTCGAC
CTGCCGTACG CCCGCAGCCC GCACCCGGCC TATGCCGACG AACACGGCGG CCATGACGGC
GCGACCAAGA TCCCGGCCTG GGAGATGATC CGCTTCAGCG TCAACATCAT GCGCGGCTGC
TTCGGCGGCT GCACCTTCTG CTCGATCACC GAACACGAGG GCCGCATCAT CCAGAGCCGC
AGCGAGGACT CGGTCATCAA GGAGATCGAG GACATCCGCG ACAAGGTGAA AGGCTTCACC
GGCGTGGTCT CCGACCTGGG CGGGCCGACG GCCAACATGT ACCGCCTGGG CTGCAAGAGC
CCGGAGATCG AGGCCGCGTG CCGCAAGCCG AGCTGCGTCT ACCCGGGCAT CTGCCAGAAC
CTCAACACCG ACCACGACGC GCTGATCCAC ATGTACCAGC GCGCCCGCCA GCTCAAGGGC
ATCAAGAAGA TCCTGATCGG CTCGGGGCTG CGCTACGACC TGGCGATCCG CTCGCCCGAG
TACATCAAGG AGCTGGTGCA GCACCACGTC GGCGGCTACC TGAAGATCGC GCCCGAACAC
ACCGAGGACG GGCCGCTGTC CAAGATGATG AAACCCGGCA TCGGCAGCTA CGACCGCTTC
AAGCAGCTGT TCGAGAAGTA CAGCGCCGAG GCCGGCAAGA AGCAGTACCT GATCCCGTAC
TTCATCGCCG CCCACCCGGG CACGCGCGAC GAGGACATGA TGAACCTGGC GGTCTGGCTC
AAGCACAACG GCTTCCGGGC CGACCAGGTG CAGACCTTCT ACCCGAGCCC GATGGCCACC
GCCACCGCGA TGTACCACTC GGGCAAGAAC CCGCTCGGCA AGGTCACGCG CAGCAGCGAG
ACGGTCGACA TCGTGCGTGG CGACAAGCGC CGCCGGCTGC ACAAGGCCTT CCTGCGCTAC
CACGACGCCA ACAACTGGCC GCTGCTGCGC GAGGCGCTGC AGGCGATGGG CCGCGCCGAC
CTGATCGGCA ACGGCAAGCA GCACCTGATC CCGACCTGGC AGCCCGCCAC CGACGGCAGC
TACGAGAGCG CGCGGCGCAA GAACTCGACC GCCACGGGGG TCAAGGCCGC GCCCAACAAG
CCGGCCGCCC GAGCCGGTGG ATCCGCGCCG CCCAAGGGCC GCATCCTGAC CCAGCACACC
GGCTTGCCGC CGCGTGAGAC CGGCGCGCCG CGCAAGGCCG GCCCGCGCGT CAGCTCGCCG
ATCATCGTGC CGGGCGCCCG GCCGCCGGCC GCCCCGGCCG GGCCGCGGCC GGGCCCCTCG
GCCAAGACCG GCGGCCGCAA GAAGGGCGGC TGA
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| Protein sequence | MPRADKPLTG YRPHWAKRFG PAPFLPMSRA EMDALGWDSC DIVIVTGDAY VDHPSFGMAV
IGRTLEAQGF RVGIIAQPDW QTADPFKALG KPNLFYGVAA GNMDSMINRY TADRKIRSDD
AYTPGGLGGK RPDRASLVYA QRCKEAYPEV PIIMGGIEAS LRRIAHYDYW QDKVRRSMVV
DAKCDLLLYG NAERAIIEVA HRLAAGENVR RMTDIRGTAF VRRSDDPDAA GWFEIDSSSV
DLVGRVDEHI NPYQTTAEQA AAQGSTCSKE EGAAAPAAAG PAADPESVYK TITFVAPPKL
TGRIKMPPRD KSVIRLPSYE QVRSDPVLYA HANRVLHLET NPGNARALVQ RHGDGNTARD
VWINPPPIPL STPEMDHVFD LPYARSPHPA YADEHGGHDG ATKIPAWEMI RFSVNIMRGC
FGGCTFCSIT EHEGRIIQSR SEDSVIKEIE DIRDKVKGFT GVVSDLGGPT ANMYRLGCKS
PEIEAACRKP SCVYPGICQN LNTDHDALIH MYQRARQLKG IKKILIGSGL RYDLAIRSPE
YIKELVQHHV GGYLKIAPEH TEDGPLSKMM KPGIGSYDRF KQLFEKYSAE AGKKQYLIPY
FIAAHPGTRD EDMMNLAVWL KHNGFRADQV QTFYPSPMAT ATAMYHSGKN PLGKVTRSSE
TVDIVRGDKR RRLHKAFLRY HDANNWPLLR EALQAMGRAD LIGNGKQHLI PTWQPATDGS
YESARRKNST ATGVKAAPNK PAARAGGSAP PKGRILTQHT GLPPRETGAP RKAGPRVSSP
IIVPGARPPA APAGPRPGPS AKTGGRKKGG
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