| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2118 |
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| Symbol | |
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| ID | 6162038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2315248 |
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| End bp | 2316870 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641664887 |
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| Product | propionyl-CoA carboxylase |
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| Protein accession | YP_001791150 |
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| Protein GI | 171058801 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.242029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCA TCACCTCCAA GCTCAACCCG CGTTCGGCCG ACTCACTTGC CAGCGCCGCC
GCGATGCGCG CGCTGGTCGA CGACCTGAAC GCCAAGCTGG CGAAGATCGC CGAAGGCGGC
GGCGAGGCCG CGCGCGCCAA GCACCTGGCG CGCGGCAAGC TGCTGCCGCG CGAGCGTGTC
GAGATGCTGC TCGACCCGGA CACGCCGTTC CTCGAGATCG CGCCGCTCGC CGCGCTCGGC
ATGTACCCCG AAAAGGACGG CAGCGACGCG GCACCCTGCG CCGGCATGGT CGCCGGCATC
GGCCGCATCT CCGGGGTCGA GTGCCTGATC GTCTGCAACG ACGCCACCGT CAAGGGCGGC
ACCTACTACC CGCTGACCGT CAAGAAACAC CTGCGCGCGC AGGAGATCGC GCAGCAGAAC
CGCCTGCCGT GCATCTACCT GGTCGACTCG GGCGGCGCCA ACCTGCCCAA CCAGGACGAG
GTCTTCCCGG ACCGCGACCA CTTCGGCCGC ATCTTCTTCA ACCAGGCCAA CATGAGCGCC
GCCGGCATCC CGCAGGTGGC CGTCGTGATG GGTTCGTGCA CGGCCGGCGG CGCCTACGTG
CCGGCGATGA GCGACGAAAC CATCATCGTC AAGAACCAGG GCACGATCTT TCTGGGCGGC
CCGCCGCTGG TCAAAGCCGC CACCGGCGAG GTGGTGACGG CCGAAGACCT GGGCGGCGGC
GACGTGCACA CGCGGTTGTC GGGCGTGGCC GATCACTTGG CTGAAAACGA CCTGCACGCG
CTGGCTCTGG CGCGTCAGGC GGTCGCGAAC CTGAACTGGC GCAAGGACGT GCCGCTGCGC
ATGGCCGAAC CGCGCGTGCC CAAGTACGAC CCGCAGGAGC TGCTGTCGGT GATCCCGACC
GACACCCGCA AGCCCTTCGA CGTGCGCGAG ATCATTGCCC GCATCGTCGA TGGCAGCGAG
TTCGACGAGT TCAAGGCCCG CTACGGCGCC ACGCTGGTGT GCGGCTTCGC GCACATCGAA
GGCATGCCGG TGGGCATCGT CGCCAACAAC GGCATCCTGT TCTCCGAGAG CGCCAACAAG
GGCGCGCACT TCATCGAGCT GTGCTGCCAG CGCAAGGTGC CACTCGTCTT CCTGCAGAAC
ATCACCGGCT TCATGGTCGG GCGCAAGTAC GAGAACGAAG GCATCGCGCG CGCCGGCGCC
AAGATGGTCA CGGCGGTGGC CTGCGCCAAC GTGCCCAAGT TCACCGTCAT CATCGGCGGC
TCGTTCGGCG CGGGCAACTA CGGCATGTGC GGCCGCGCCT ACAGCCCGCG TTTCCTGTGG
ATGTGGCCGA ACGCGCGCAT CTCGGTGATG GGCGGCGAGC AGGCCGCCAG CGTGCTGGCC
ACCGTCAAGC GCGACGGCAT CGAGGCCAAG GGCGGCGCCT GGAGCGCCGA CGAGGAAGCG
GCCTTCAAGG CGCCGATCCT CAAGCAGTAC GAGGTGCAGG GCCACCCGTA TTTCGCCAGC
GCGCGCCTGT GGGACGACGG CGTGATCGAC CCGACCGACA CCCGTCGCGT GCTGGCACTC
GGCCTGTCGG CGAGCCTGAA CGCGCCGATC CCGGACGCCA AGTTCGGCGT CTTCCGGATG
TGA
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| Protein sequence | MPVITSKLNP RSADSLASAA AMRALVDDLN AKLAKIAEGG GEAARAKHLA RGKLLPRERV
EMLLDPDTPF LEIAPLAALG MYPEKDGSDA APCAGMVAGI GRISGVECLI VCNDATVKGG
TYYPLTVKKH LRAQEIAQQN RLPCIYLVDS GGANLPNQDE VFPDRDHFGR IFFNQANMSA
AGIPQVAVVM GSCTAGGAYV PAMSDETIIV KNQGTIFLGG PPLVKAATGE VVTAEDLGGG
DVHTRLSGVA DHLAENDLHA LALARQAVAN LNWRKDVPLR MAEPRVPKYD PQELLSVIPT
DTRKPFDVRE IIARIVDGSE FDEFKARYGA TLVCGFAHIE GMPVGIVANN GILFSESANK
GAHFIELCCQ RKVPLVFLQN ITGFMVGRKY ENEGIARAGA KMVTAVACAN VPKFTVIIGG
SFGAGNYGMC GRAYSPRFLW MWPNARISVM GGEQAASVLA TVKRDGIEAK GGAWSADEEA
AFKAPILKQY EVQGHPYFAS ARLWDDGVID PTDTRRVLAL GLSASLNAPI PDAKFGVFRM
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