Gene Lcho_2105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_2105 
Symbol 
ID6161343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand
Start bp2302812 
End bp2303180 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content70% 
IMG OID641664874 
Producthypothetical protein 
Protein accessionYP_001791137 
Protein GI171058788 
COG category[S] Function unknown 
COG ID[COG3564] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC GCGTCATCGC CACCGAGGCG GCCTGCGCAC TGATCGAGCG CCTGCGCCAG 
CAGCACGGCA AGATCTTCTT CTACCAGTCC CACGGCTGCT GCGAGGGCAG CGTGCCGATG
TGCTTCGCCG AAGGCGAGAT GGGCCTCAAC AGCGAGGACG TGCAGCTCGG CGCGATCGGC
GGCGTGCCCT TCTACGCCAG CCGCGGCCAG AGCGACTACC TGCAGGGCCT GCAGCTCACC
ATCGACGTGG TGCCGGGTGA CGGCGGCACC TTCTCGCTCG AAGAAGGCTC GGGCCAGCAC
TTCGTCGCCC GCCTGCGGCT GTGGACCGAC GACGAGGCCC GCGCGCTGCA GGCCCAGCAG
GCCGGCTGA
 
Protein sequence
MIERVIATEA ACALIERLRQ QHGKIFFYQS HGCCEGSVPM CFAEGEMGLN SEDVQLGAIG 
GVPFYASRGQ SDYLQGLQLT IDVVPGDGGT FSLEEGSGQH FVARLRLWTD DEARALQAQQ
AG