| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2102 |
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| Symbol | |
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| ID | 6161422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2298079 |
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| End bp | 2299149 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664871 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001791134 |
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| Protein GI | 171058785 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCTGC ATCTCGACCA GATCAGTGTC CAGTACGCCG CAGCGGCCCG CCCGGCGGTC
CAGCATGTCT CGCTGGGCTT GCGGCGCGGC CAGGTCGGCG CGTTGATCGG CCCATCGGGC
TGCGGCAAGA CCTCGCTGCT GCGCGCGGTG GCCGGGCTGG AGCGGCTGAA GTCCGGCAAG
GTGGTGCTGG ATCAGCGCAC AGTCAGCGAT GCCGCGCTGG GCGTGCACGT CGACGCCGAG
GCGCGCCGCA TCGGCATGGT GTTCCAGGAC TACGCGCTGT TCCCGCACAT GACGGTGGCG
CAGAACATCG CCTTCGGCCT GCACGGCCAG TCGGCTGCGG CGCAGCGCGA GCGCGTGGCG
CAGATGCTCG ACCTGGTCGG CCTGGGCGGG GCGGCCAAGC GTTATCCGCA TCAGCTCTCG
GGCGGTCAGC AGCAGCGCAT CGCGCTGGCG CGGGCGCTGG CGCCGCAGCC CAGCCTGCTG
CTGATGGACG AGCCGTTCTC GAGCCTCGAC ATCGACCTGC GCGAGCGCCT GGCGCAGGAG
GTGCGCGCGA TCCTGAAGCA GACCGGCACG ACGGCCCTGT TCGTCACCCA CGACCAGCTC
GAGGCCTTTG CCGTGGCCGA CGTGATCGGC GTGATGAACC ACGGCCAGCT CGAACAGTGG
GACGAGGCCT ACGCGCTCTA CCACCGGCCG GCGACGCGGT TCGTGGCGAG CTTTGTCGGG
CACGGCGTGT TCGCCCAGGC CGAACTGGTG GTCGGCGCCG ACGGCCCGCA GGTGCGCACG
CCGCTGGGCC TGCTGTCGGA CCCGATCGAA TGCCCGCTGC CGGGCAACGA CGGCTTGTGC
GAGGTGCTGC TGCGCGCCGA CGACATCGTG CACGACGACG ACAGCCCGGT GCGGGCACAG
ATCCAGGCCA AGGCGTTCCG CGGCTCGGAG TTTCTCTACA CCCTGAAACT CGCCAGCGGC
GAGCAGGTTC TGGCCCATGT GCCATCGCAT CACGACCACG CGATCGGCGA GTGGATCGGC
GTGCGCGCCG AGATGGATCA CGTGGTGACG TTCCCGCGGC TGGTGGCCTG A
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| Protein sequence | MYLHLDQISV QYAAAARPAV QHVSLGLRRG QVGALIGPSG CGKTSLLRAV AGLERLKSGK
VVLDQRTVSD AALGVHVDAE ARRIGMVFQD YALFPHMTVA QNIAFGLHGQ SAAAQRERVA
QMLDLVGLGG AAKRYPHQLS GGQQQRIALA RALAPQPSLL LMDEPFSSLD IDLRERLAQE
VRAILKQTGT TALFVTHDQL EAFAVADVIG VMNHGQLEQW DEAYALYHRP ATRFVASFVG
HGVFAQAELV VGADGPQVRT PLGLLSDPIE CPLPGNDGLC EVLLRADDIV HDDDSPVRAQ
IQAKAFRGSE FLYTLKLASG EQVLAHVPSH HDHAIGEWIG VRAEMDHVVT FPRLVA
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