| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2101 |
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| Symbol | |
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| ID | 6161421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 2296457 |
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| End bp | 2297905 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641664870 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001791133 |
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| Protein GI | 171058784 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA AGTGGAAAGT GGCGGGTTGG GTGGCAGCTG GCGCGGTGGC CGGGGCCCTC
ACGACGATGC AGTTGCAGGC GACCGCTCGC AGCGCGATGT CGCCGCTGCC CATCGAGGAC
ATGCAGCAGC TCGCGGCTGT GTTCGACCTG GTGAAACGCT CGTATGTCGA GCCCGTGGAT
GAAAAGAAAC TCATCCGCGA CGCCATCGGC GGCATGGTTT CGGGGCTCGA TCCGCACTCC
GTCTATTTCG AAGGCCAGGC TTTCAAGGAA TTCCACGAAG GCATCAGCGG CAAGTTCACC
GGCGTGGGTA TCCAGATCGA GATGGACGAC GGGCTGGTGA AGGTGGTCTC CCCGATCGAG
GGTTCACCAG CTTTCCGTGC CGGCATCCAG ACCGGCGACC TGATCACGCG CATCGACGAC
ACCGCGGTCA AGGGCCTGAC GATGGATCAG GCGATCAAGC GCATGCGCGG GCCCAGCAAT
TCCAAGGTCA TGCTGATGAT CTTCCGCAAG GCCGAGAACC GGACCTTCCC GGTGACCATC
GTGCGCGAGG AGATCAAGAC CAAGAGCGTG CGCTCCAAGG TGGTCGAGCC GGGTTATGCG
TGGATCCGCG TCAGCCAGTT CCAGGAGCCG ACGCTGCGCG ATTTTGCCGA GCAGCTCAAG
GACATCTTCA AGCAGGAGCC CGGCCTGAAG GGCCTGGTGC TGGATCTGCG CAACGACCCG
GGCGGCCTGC TCGACAGCGC GGTGGGCATC TCGGCGGCCT TCCTGCCGCG TGACGCGGTG
GTGGTGTCGA CCAACGGCCA GATCGCCGAA TCGCGCAGCA CCCTGAAGGC GGCGCCGGCG
TACTACTCGC GCGACGGCAG CGACGTGCTG GCGGGCGTGC CGGCGCTGAT CAAGACGGTG
CCGGTGGTGG TGCTCGTCAA CGAAGGTTCG GCCTCGGCGA GCGAGATCGT CGCCGGCGCG
CTGAAGGATC ACAAGCGCGC CGTCATCATG GGTTCGCAGA CCTTCGGCAA GGGCTCGGTG
CAGAGCGAGA TGACCCGCCT GCCGATGCCC AACACGTCGT TGAAGATCAC CACCGCGCGC
TACTACACGC CGTCGGGTCA GTCGATCCAG GCCAAGGGCA TCGTGCCGGA CGTGCTGGTC
GACGAGACCG CCGAGGGCAG CCCGTTCGCC GCCCTGCGCA TGCGTGAGGC CGACCTCGAT
CGCCACCTGA CCGGAGGTGG CGAGAGCGGC AAGAAGGACG CCGCTCGCGA GAAGGCGCGT
GAAGAGGCGC TCAAGAAGCT CGAAGAGGAA AACGGCAAGA ACAGGGACAA GGCGCCGGCG
CGGCTGCCCG AGTTCGGTAC CGCTGAAGAC TTCCAGTTGC AGCAAGCGCT CAACCGCTTG
AAGGGCAAGC CGGTACTCGC CAGCCAGACG CAGTCCGAAC GCAAGGCCGA AGAGCCCAAG
AGCAACTGA
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| Protein sequence | MSSKWKVAGW VAAGAVAGAL TTMQLQATAR SAMSPLPIED MQQLAAVFDL VKRSYVEPVD
EKKLIRDAIG GMVSGLDPHS VYFEGQAFKE FHEGISGKFT GVGIQIEMDD GLVKVVSPIE
GSPAFRAGIQ TGDLITRIDD TAVKGLTMDQ AIKRMRGPSN SKVMLMIFRK AENRTFPVTI
VREEIKTKSV RSKVVEPGYA WIRVSQFQEP TLRDFAEQLK DIFKQEPGLK GLVLDLRNDP
GGLLDSAVGI SAAFLPRDAV VVSTNGQIAE SRSTLKAAPA YYSRDGSDVL AGVPALIKTV
PVVVLVNEGS ASASEIVAGA LKDHKRAVIM GSQTFGKGSV QSEMTRLPMP NTSLKITTAR
YYTPSGQSIQ AKGIVPDVLV DETAEGSPFA ALRMREADLD RHLTGGGESG KKDAAREKAR
EEALKKLEEE NGKNRDKAPA RLPEFGTAED FQLQQALNRL KGKPVLASQT QSERKAEEPK
SN
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